Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3720 ATGGATTTTTGGAGCATGATTTGTGAAGATTCTTCTTGTTCTGAGATTGAAGGAAGGTCTTTATGTTTTGACATCAAGTTTCTCAAAGATCCTTCTTCATGCACCAACCATTTGTTCATCATTTGCTTTGAGCTGTTCGTGTTGATCATGTTGTCAGCAGTTATGATCCAAAAGAAGTCTTTGTTAGCGCAATTTCGGAGTGTAATAAGAGTGGAAGGACATTCAAAATTGCAACTAGTTTCTTCCATAACCAATGGTTGTATTGGTTTGTTGCATTTGTTCTTAGGAATTTGGATTTTAGAGGAGAAGTTAACGAAAAATCACACTATTTTTCCGCTTAATCGGTGGCTGCTAGAATTTCTTCAAGGATTCACATGGATGTTAATTGCTTTGACTACAAGTTTTCTGCTAAAACAACTTCAAAGAACATGGTTGAGATTGTTTTCAATTCTTATATTCTTTGTTTCTAGTATTTTTTGTGCATTTTCGTTATCTTATGCATTTCGAAGCAGAGCATTTTCGCTTAGGGTAGTTTTAGATGTTTTATCTTTTTTAGGAGCATTTTCGCTACTCATTTGCACATACAAAGTATGTAAATATGAAGAAAATGACCGGGAAATTGATGAAAGTCTGTGTGCCCCTTTAAATAGCCATATCAATGAAGTTGATCATGTTAGCAATGTAAGTGTAACTGAATTTTCCAAAGCAGGATTATTTAGTTTGATGTCATTTTGGTGGTTGAATCCATTGATTAAAAGGGGTCGAGAAAAAATACTTCACGACGAGGACATCCCAACGTTGCGGGAGTGTGACCGAGCAGAAGTATGTTATTCAATGTTTATAGATCAACTGAACAGACAGAGGCAGAACGACGAATCATCATCTCGAGCATCAGTTTTACGGACAATAATTTTGTGCCATCGTAGAGAAATTTTGATATCGGGATTCTTTGCATTACTCAAGGTACTCACACTCTCTTGTTGTCCTATAATTTTGAATGCGTTTATTTTGGCGGCCGAGGATAATCAAAGTTCAAAATATGAAAGTTATGTATTGGCCATCTCACTTTTGGTTACAAAGATTTTGGAATCCCTATCGCAAAGGCAGTGGTATTTTCGCGCTAGAATTATTGGTATGAAAGTTAAATCATTACTTATCGCAGCCGTTTATAAGAAACAATTGAGGTTATCCAATGCTGCTAAATTGATTCACTCTGGTGGCGAGATAATGAATCATGTGAATGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAGACATGGACAACATTTCTCCAACTATGTATTGCATTAGTCATTATTTTTCATGCGGTTGGGCTTGCGACAATTGCATCGTTGGTGGTGATAGTTTTGACGGCGCTTTCAAATACTCCACTAGCAAAGTTACAGCATAAGTTTCTAAGCAGACTTCTTGTGGCACAAGATGAAAGGTTAAAGGCTAGTTCTGAGGCTCTGGTGAATGTTAAAGTGTTGAAGTTATATGCGTGGGAAATCCATTTTAAAAATGCTATCGAAAGCCTAAGATTTCTTGAACTCGAATGGTTATCCTCAGTGCTACTACAAAAAGCATACAATGTCATTCTCTTTTGGTTTTCGCCGTTTTTGATCTCTGCTGCTACATTCGGTGCATGTTACTTCTTGAATGTTCCTTTACATGCAAATAATATATTCACCTTTGTTGCAACAATACGCCTTATGCAAGATCCGATTTCAACCATCCCTGATGTTATCGGAGTGATCATTCAAGCAAATATTGCATTTTCTCGGATTGTGAAATTCCTTGACGCACCTGAGTTGCAGAGTTCAAATTTCAAAACGAGTCGCTTTGATGAGAAGTTGAAGGGCTCAATTTTAATCGAGTCTGCTGAATTTTCATGGGAATGTGATATATTGAAACCGACAATAAGAAACATAAATTTAAAGGTTAGTGTTGGTCAAAAGATAGCCATTTGTGGAGAAGTTGGCTCAGGTAAATCAAGTCTCTTAGCAGCGATTCTCGGAGAAGTCCCTAATACTAAAGGAAATATTGAAGTTTATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATACAAACAGGAACGATACAAGAAAACATTTTGTTCGGATCAGCTATGGATGTTCAAAGGTATCAAGAAGCAATTCATCGGTCTTCTTTGATGAAGGACCTTGAATTGTTTTCACATGGTGATCTCACTGAAATAGGAGAAAGAGGAGTTAACTTGAGTGGGGGCCAAAAGCAACGAATTCAACTTGCTCGGGCTCTTTATCAGAATGCTGATGTATATCTCTTAGACGATCCATTCAGTGCTGTTGACGCACACACTGCCACTAATTTGTTGAATGAATACATATTGGAAGGACTTACTGGAAAGACGGTTCTTCTTGTGACGCACCAAGTTGACTTTCTCCCTGCATTTGATTATGTTTTGTTGATGTCAAATGGGAAAATCCTGCAAGCTGCTCCCTATCATGATCTACTAACCTCGAGCCAAGAATTTGTCGACCTTGTCAACGCTCACAAAGAGACTGCTGGTTCCGATCATCTTGTAAATGTTACTTCATCCACAAGGCATTCAAATTCTGATAGTGAGATTAAAAAATCTTTCACGGAAAAACAGTTTAAACCTTCAAACATCGATCAATTAATTAAGCAAGAAGAGAGGGAAAGAGGAGACACAGGGTTGAAGCCTTACTTACAATATCTCGATCACAAAAGAGGAAAGATATACTTCTTTCTTGGTTCTATTTGTCACCTAGTGTTTGTGATTTGCCAGATATTACAAAACTCGTGGATGGCTGTTAATGTCGACAATCCTCGTGTCAGCACGTTGCAATTGGTTGCGATTTACTTGTTGATAGGAATTAGCTCTAATGTTTTCATGATAATCAGAAGTCTTCTTGCAGCTCTATTAGGTTTTCAATCATCAAAATATTTATTTTCACAGCTTATGAACTCCCTTTTTCGAGCACCAATGTCTTTTTATGACTCTACACCACTTGGAAGGATACTTAGTAGGGTTTCATCTGACATGAGCATTGTGGATCTTGATATCTCATTTAATCTCGCTTATGCCGTTGGATCAACTATAAATTGCTACATGGATCTTGTAATATTAACATCAGTCACATGGCAAGTCTTGTTTGTCTCTATACCAATGGCTTATGTGATTATACAATTACAGAGACACTACTATTCATGTGCAAAAGAACTTATGCGGATGAACGGCACAACAAAATCATCTATAGTGAATTATGTAGCTGAAACTGTTGCTGGAGCTATGACAATAAGGGCTTTTGAGGAGGAAGATCGATTTTTCGAAAAGAATCTTCATCTAATTGATGTCAATGCTAGTGCTTTCTTCCACAGTTTTGCCTCAAATGAATGGTTGATCCAACGGGTAGAAACAGCGTATGCAGTCGTTCTTGCCTCCGCGGCCTTGTGCATTGCTATGCTTCCATTTGGAACTTTAACATCTGGATTTATCGGTATGGCCCTTTCATACGGCCTTTCACTAAACGGTTCCTTAGTATACTCAATTCAAAGCCAATGCATTGTAGAAAATTATATAGTATCTATAGAGAGGATAAATCAATACACTCATATACCAAGTGAGGCCGACGAAGTGATTGAAGGAAATCGTCCTCCAGTTAATTGGCCAGCAGCAGGCAAAGTAGAAATACAAGATTTGCAGATACGATACAGGCCTAATGCACCACTTGTACTCCATGGTATCAATTGCACATTTGAAGGAGGACACAAGATTGGTATTGTAGGAAGAACGGGCAGCGGAAAATCCACTCTGATAGGTGCTTTGTTTCGCCTTGTGGAGCCGGCCGGAGGCAAAATTATAATTGATGGAATAAACATATCATCTATTGGCCTTCATGACTTGAGGTCAAGTCTAAGTATTATACCTCAGGATCCTACCCTTTTTATTGGGACAGTTAGATATAATTTGGACCCTTTATCTCAACATTCTGATCAAGAAATATGGAAGGTTCTTCAAAAGTGTCATTTGCGAGAGATTGTCAAAGATAAAGGTGGCTTAGATTCACCAGTTGTTGAAGACGGATCAAATTGGAGCATTGGACAAAGGCAATTATTCTGTTTAGGGCGCGCTCTTTTGAGGCGAAGTAGGATATTGGTATTGGACGAAGCAACTGCGTCAATTGATAATTCAACTGATATGATTCTGCAAAAAACCATTAGAGTTGAATTTGCAGATTGTACTGTGATCACGGTAGCACACAGGATACCAACTGTGATGGATTGCAATATGGTTCTTGTCATTAGTGATGGAAAAATGGGTGAGTATGATGAGCCAATGAAGTTGATGAAGAGAGAAAGATCTTTGTTTGGAAACCTTGTAAATGAATATTGGTCTTATTTTCAGTCTGCAAATCACATTGAAGCCTAG 4452 0.3796 MDFWSMICEDSSCSEIEGRSLCFDIKFLKDPSSCTNHLFIICFELFVLIMLSAVMIQKKSLLAQFRSVIRVEGHSKLQLVSSITNGCIGLLHLFLGIWILEEKLTKNHTIFPLNRWLLEFLQGFTWMLIALTTSFLLKQLQRTWLRLFSILIFFVSSIFCAFSLSYAFRSRAFSLRVVLDVLSFLGAFSLLICTYKVCKYEENDREIDESLCAPLNSHINEVDHVSNVSVTEFSKAGLFSLMSFWWLNPLIKRGREKILHDEDIPTLRECDRAEVCYSMFIDQLNRQRQNDESSSRASVLRTIILCHRREILISGFFALLKVLTLSCCPIILNAFILAAEDNQSSKYESYVLAISLLVTKILESLSQRQWYFRARIIGMKVKSLLIAAVYKKQLRLSNAAKLIHSGGEIMNHVNVDAYRIGEFPFWFHQTWTTFLQLCIALVIIFHAVGLATIASLVVIVLTALSNTPLAKLQHKFLSRLLVAQDERLKASSEALVNVKVLKLYAWEIHFKNAIESLRFLELEWLSSVLLQKAYNVILFWFSPFLISAATFGACYFLNVPLHANNIFTFVATIRLMQDPISTIPDVIGVIIQANIAFSRIVKFLDAPELQSSNFKTSRFDEKLKGSILIESAEFSWECDILKPTIRNINLKVSVGQKIAICGEVGSGKSSLLAAILGEVPNTKGNIEVYGKFAYVSQTAWIQTGTIQENILFGSAMDVQRYQEAIHRSSLMKDLELFSHGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLLNEYILEGLTGKTVLLVTHQVDFLPAFDYVLLMSNGKILQAAPYHDLLTSSQEFVDLVNAHKETAGSDHLVNVTSSTRHSNSDSEIKKSFTEKQFKPSNIDQLIKQEERERGDTGLKPYLQYLDHKRGKIYFFLGSICHLVFVICQILQNSWMAVNVDNPRVSTLQLVAIYLLIGISSNVFMIIRSLLAALLGFQSSKYLFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDMSIVDLDISFNLAYAVGSTINCYMDLVILTSVTWQVLFVSIPMAYVIIQLQRHYYSCAKELMRMNGTTKSSIVNYVAETVAGAMTIRAFEEEDRFFEKNLHLIDVNASAFFHSFASNEWLIQRVETAYAVVLASAALCIAMLPFGTLTSGFIGMALSYGLSLNGSLVYSIQSQCIVENYIVSIERINQYTHIPSEADEVIEGNRPPVNWPAAGKVEIQDLQIRYRPNAPLVLHGINCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIIDGINISSIGLHDLRSSLSIIPQDPTLFIGTVRYNLDPLSQHSDQEIWKVLQKCHLREIVKDKGGLDSPVVEDGSNWSIGQRQLFCLGRALLRRSRILVLDEATASIDNSTDMILQKTIRVEFADCTVITVAHRIPTVMDCNMVLVISDGKMGEYDEPMKLMKRERSLFGNLVNEYWSYFQSANHIEA* 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3720 1483 CDD ABC_6TM_ABCC_D1 313 600 IPR044746 GO:0140359
Mal8g3720 1483 Pfam ABC transporter 1253 1400 IPR003439 GO:0005524
Mal8g3720 1483 Gene3D - 1220 1469 IPR027417 -
Mal8g3720 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1199 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3720 1483 SUPERFAMILY ABC transporter transmembrane region 908 1216 IPR036640 GO:0005524|GO:0016021
Mal8g3720 1483 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524
Mal8g3720 1483 CDD ABCC_MRP_domain1 627 827 - -
Mal8g3720 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 592 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3720 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 850 IPR027417 -
Mal8g3720 1483 SUPERFAMILY ABC transporter transmembrane region 300 607 IPR036640 GO:0005524|GO:0016021
Mal8g3720 1483 Gene3D - 622 856 IPR027417 -
Mal8g3720 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1466 IPR027417 -
Mal8g3720 1483 Pfam ABC transporter 646 779 IPR003439 GO:0005524
Mal8g3720 1483 Gene3D ABC transporter type 1, transmembrane domain 884 1219 IPR036640 GO:0005524|GO:0016021
Mal8g3720 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 850 IPR003439 GO:0005524
Mal8g3720 1483 SMART AAA_5 1262 1453 IPR003593 -
Mal8g3720 1483 SMART AAA_5 654 827 IPR003593 -
Mal8g3720 1483 Pfam ABC transporter transmembrane region 312 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3720 1483 Pfam ABC transporter transmembrane region 920 1181 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3720 1483 CDD ABC_6TM_ABCC_D2 922 1211 IPR044726 GO:0140359
Mal8g3720 1483 Gene3D ABC transporter type 1, transmembrane domain 297 612 IPR036640 GO:0005524|GO:0016021
Mal8g3720 1483 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1480 - -
Mal8g3720 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1480 - -
Mal8g3720 1483 CDD ABCC_MRP_domain2 1234 1453 - -
Mal8g3720 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1469 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3720 Mal-Chr8 107490186 107496348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3720 591 838 Calmodulin-binding Proteins AT2G36910 28.839 2.15e-23 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3720 8 107490186 107496348 Mal1g2133 1 27914086 27919995 PCT