Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3708 ATGGAACCCTTTGATGAAAATGAAGAGCATGTTGTTAATGAGTCTGTCAATAATGATTCATATGTTGGTGATTTAGAGGCTAACAATGTTCAAGAACCTGCTCTTGGAATGGAATTTGAGTCACAGGAAGATGCTTATTCTTTCTATGTTCAGTATGCTAAATGTGTTGGATTTGGTGTATCCACTAAAAGTAGTCGCCGTTCAAAAATTTCTAGACAGTTTATTGATGTGAAATATGCTTGCACAAGATATGGGAAAAAACGAGAGTCGACCGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTGGCTTACATATTAAAAGAAGATGTGATGAAAAATGGGTTGTTCACGACTTCATCAAAGATCACAATCATGAACTTTTCCCAACATATGCACATTATTTTCCTTGCCATAGAACCATCAATGAAGCTCAAAAGAAATGTATTGAAACTATGCAACATGTTGGAGTGAGAACAACCAAAATCTATGCCACAATGGCCAAACAACACGGGGGATATGAGAAAGTTGGTTGCTTGGAGAAAGATATTAGAAATTATTTAGATAAGGATCGTCGTTTGAATTTAGAATCAGGAGATGCAAATGCAATGTTGGAATTCTTTTATGCAATTGATATGGATGATGATGGTCGTGTAAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGATGATTATCAAGAGTTTGGAGATGTGATTTCATTTGATACAACATATATCACAAACAAATATAAAATGCCATTTGCTTCATTCATTGGTGTGAATAATCATTTCCAGTCAAGATTACTTGGTTGTGCGTTACTCGCAAATGAGTCCTCTGAGAGTTTCACATGGTTGATGAAAACATGGCTTAGGGAAATGGGTGGAAAACCTCCAAATGCAATGATAACTGACCAAGACAGGGCAATGAAAGTGGCTATTGAAAAGGTATTTCCAAATACTCGACATCGTTTTTGCCTTTGGCATATACTAAGAAAGGTTCCCGAGAAGCTTGGCCATTCTAGGTCAATACAACAGTTTGAAGATAAATGGGAAGAAATGGTAGAGAAATTTCAACTATCAAAGGATGGGTGGATTCAGTCTTTATATGGAGAACGTGAACATTGGGTTCCTGTTTACATGAAAGATACCTTTTTCGGTGGGATGTCAACAACTCAAAGATCAGAGAGCATCAACTCCTTTTTTGACAAATATGTAAGTAAGAAAACTGCATTGAAGGAATTTGTTGAAAAATATAAAGTTGCTTTGCAAGATAGAGAAGAAGCAGAAATGCATGTTGATTTTAATACATGGCATAAACAACCTGTTCTTAAGACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTATTCAAAAAATTCCAAGTTGAAGTTATGGGATTATCTGGTTGTCATCTTATGAAAAGGAATGAAGATAGTCAGCCCACCTCTTTTACAATATTCGACTTTCAAAAGATGGAAGAATTTGTTGTAGAGTGGGATGCATCGAAAGAGGAAATTTCTTGCATATGTCGTTTGTTTCAGTATAATGGGTATCTTTGTAGGCATTCATTGATGGCCCTCCAATCTAGTGGTGTCTTTGCTGTCCCATCACACTATATATTGAGAAGATGGACAAAGGATATAAGAAATATCTGTTCCAGTAAGGAGAGATATGATCGTTTATATCCAAAGGCCTTTCAATTGTTGGAGGAAGGATCATTAACTAATGAGAGTTATAACTTTGCATGTCATGCATTAGAAGATGCCTTGAAACAATGTGCAATCCTTAACCAATCCTTGAAAAATAGCCAAGAAAATAGCAGGAAGAACATTTTGCTTGACAAGAAACTACTTGATCCTCAAGATTCAAAAACAAAAGGGGCTCCGAGAAGAATAAAGAGTGGCATTGAAAGAGGTCGTAAGAGAACATCTAGTGGTAGAGTGAAAAAGGCTGCAATTGTTGAAAAAGAAGCAATAGTTCTCAATGAAGAAGTTGTGGCTGCATCTACATCAATGGTATAA 2046 0.3627 MEPFDENEEHVVNESVNNDSYVGDLEANNVQEPALGMEFESQEDAYSFYVQYAKCVGFGVSTKSSRRSKISRQFIDVKYACTRYGKKRESTAQNPRPCLKVECEAGLHIKRRCDEKWVVHDFIKDHNHELFPTYAHYFPCHRTINEAQKKCIETMQHVGVRTTKIYATMAKQHGGYEKVGCLEKDIRNYLDKDRRLNLESGDANAMLEFFYAIDMDDDGRVKNVFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFASFIGVNNHFQSRLLGCALLANESSESFTWLMKTWLREMGGKPPNAMITDQDRAMKVAIEKVFPNTRHRFCLWHILRKVPEKLGHSRSIQQFEDKWEEMVEKFQLSKDGWIQSLYGEREHWVPVYMKDTFFGGMSTTQRSESINSFFDKYVSKKTALKEFVEKYKVALQDREEAEMHVDFNTWHKQPVLKTPSPFEKQMSMIYTHEVFKKFQVEVMGLSGCHLMKRNEDSQPTSFTIFDFQKMEEFVVEWDASKEEISCICRLFQYNGYLCRHSLMALQSSGVFAVPSHYILRRWTKDIRNICSSKERYDRLYPKAFQLLEEGSLTNESYNFACHALEDALKQCAILNQSLKNSQENSRKNILLDKKLLDPQDSKTKGAPRRIKSGIERGRKRTSSGRVKKAAIVEKEAIVLNEEVVAASTSMV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3708 681 Pfam SWIM zinc finger 507 537 IPR007527 GO:0008270
Mal8g3708 681 Pfam MULE transposase domain 241 334 IPR018289 -
Mal8g3708 681 Coils Coil 594 614 - -
Mal8g3708 681 Pfam FAR1 DNA-binding domain 47 132 IPR004330 -
Mal8g3708 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 618 IPR031052 GO:0006355
Mal8g3708 681 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 13 618 - -
Mal8g3708 681 SMART 26again6 514 541 IPR006564 GO:0008270
Mal8g3708 681 ProSiteProfiles Zinc finger SWIM-type profile. 503 539 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3708 Mal-Chr8 107015221 107022223 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g3708 MULE 1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3708 - - dzi:111309578 816.994