Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3685 ATGGAAAAGCTGGTGAGCATGGGTTTTTCCGACGAGTTAGCTGCCCAAGCATTAGCTGGTAGATCCATCCACGAAGCCATCGATTGGATTCTCAATCAAAACCCTAACTCTAACTCTTCACCATCATCATTTTCCTTCCAACCCAAACTCAATCGTTTCTTCCAACAACAACAAGAACAAAAACAAACCAAACGCATCAAGTTATCACCTTCACCATCACCACCCTCACAAACACAAACCCTCATTCAAAACAAACCCTCTTTTTTCTTCAATAAACAAACTCATGAAACCAACACTCACAAACCGTTATACGAACGTTTGCGTCCAACAACATTAGACGATGTTGTCGGACAGGATCATCTCCTCGCAACAACCAATTCCATTCTTCGCAACCGTCTCCCTTCCATTATCCTGTGGGGTCCACCTGGTACTGGTAAGACCACCATTGCTAAAGCTATTGTCAACTCAACAAATTCAACTTTCTATCGCTTTGTCTCTTTATCTGCCGTTACTAGCGGCGTTAAAGACGTTAGAGATGTTGTTGAGGAAGCTAGAAAACTTAGACTCAGAACAAAACAAACCACTGTTCTCTTTGTTGATGAAGTTCACAGGTTTAATAAATCTCAACAGGATTCTTTCTTACCTGTTATTGAAGATGGTAGCATTGTCTTCGTTGGCGCCACTACTGAAAACCCTTCTTTTCATTTGACCACGCCACTTTTGTCTCGTTGTCGTGTCCTTACCCTTAACCCTCTTCAACCACGTCACATTGTTTTGCTTCTCAACCGTGCTGTCGCCGATACGGACAAAGGCTTGGTTCAAAGCCTTGGTTTTGGTTCTGGTTCTTCCCAAGTTGATGTCAGTGTTGGTGAGAATGTGGTTGATTTCATAGCTAACAATTGTGATGGAGATGCTCGTGTTGCTTTGAATGTATTGGAGATTGCTGGTGTTAATGCGACTGCTCGGGTACAACAGGATAATCAAGAATGCAAGGATGTTGTTAGTGTCGGTGTTAGTGTTGAGGATGCTAAGGAGGCACTTCAATGCAAGCATCTTGCTTATGATAAAGATGGGGAAGAACACTATAATTTAATCAGTGCACTGCACAAGTCTATGAGGGGAAGTGATGCGGATGCAGCGATTTATTGGTTGGCAAGAATGCTACAAGGAGGTGAAGAGCCGCTTTATATTGCACGTAGGCTTGTAAGGTTTGCAAGTGAGGATGTTGGTTTGGCTGATCCTTTGGCTCTTAATCAAGCTGTATCCTGTTACCAAGCTTGTCACTTTATTGGAATGCCTGAGTGCAATCTCATTCTTGCACAATGTGTGGCTTACTTGGCTTTGGCTCCTAAATCTATAGCAGTTTATAGAGCGATTGGAGCTGCTGAGAAGGTAGTGAGGGAGTCGGTTGGACAGAATGAAGGTGTGCCTCTTCATCTCAGGAATGGGAAGGGATACATATACCCTCCTGACAACCCTTCTTCAACACAGAGCTACTTACCACCCTCCCTTCAAGGGTTCAAATTCCTCAATTGGCCCGACATGAATCCCTCGGAATCTGATGAATGA 1569 0.4359 MEKLVSMGFSDELAAQALAGRSIHEAIDWILNQNPNSNSSPSSFSFQPKLNRFFQQQQEQKQTKRIKLSPSPSPPSQTQTLIQNKPSFFFNKQTHETNTHKPLYERLRPTTLDDVVGQDHLLATTNSILRNRLPSIILWGPPGTGKTTIAKAIVNSTNSTFYRFVSLSAVTSGVKDVRDVVEEARKLRLRTKQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLTTPLLSRCRVLTLNPLQPRHIVLLLNRAVADTDKGLVQSLGFGSGSSQVDVSVGENVVDFIANNCDGDARVALNVLEIAGVNATARVQQDNQECKDVVSVGVSVEDAKEALQCKHLAYDKDGEEHYNLISALHKSMRGSDADAAIYWLARMLQGGEEPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNLILAQCVAYLALAPKSIAVYRAIGAAEKVVRESVGQNEGVPLHLRNGKGYIYPPDNPSSTQSYLPPSLQGFKFLNWPDMNPSESDE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3685 522 Pfam MgsA AAA+ ATPase C terminal 374 511 IPR021886 -
Mal8g3685 522 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 15 519 - -
Mal8g3685 522 PRINTS CbxX/CfqX superfamily signature 184 203 IPR000641 GO:0005524
Mal8g3685 522 PRINTS CbxX/CfqX superfamily signature 135 150 IPR000641 GO:0005524
Mal8g3685 522 PRINTS CbxX/CfqX superfamily signature 304 316 IPR000641 GO:0005524
Mal8g3685 522 CDD HLD_clamp_RarA 252 348 - -
Mal8g3685 522 Pfam AAA C-terminal domain 286 373 IPR032423 -
Mal8g3685 522 Gene3D - 1 62 - -
Mal8g3685 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 329 IPR027417 -
Mal8g3685 522 Gene3D - 452 520 - -
Mal8g3685 522 MobiDBLite consensus disorder prediction 55 81 - -
Mal8g3685 522 Gene3D - 252 334 - -
Mal8g3685 522 SUPERFAMILY UBA-like 2 36 IPR009060 GO:0005515
Mal8g3685 522 Gene3D - 348 451 - -
Mal8g3685 522 CDD AAA 116 245 - -
Mal8g3685 522 Gene3D - 90 250 IPR027417 -
Mal8g3685 522 SUPERFAMILY post-AAA+ oligomerization domain-like 358 516 IPR008921 GO:0003677|GO:0006260
Mal8g3685 522 Pfam ATPase family associated with various cellular activities (AAA) 136 246 IPR003959 GO:0005524|GO:0016887
Mal8g3685 522 SMART AAA_5 132 252 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3685 Mal-Chr8 106747845 106749413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3685 102 374 Core DNA Replication Machinery Family AT1G77470 23.843 3.12e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3685 K07478 - gmx:100799257 717.613