Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3666 ATGGAGAGAAAAGAACCATCTCAACCTCCAAATCAAGGTAATGAAAAGAAAAAACATTATAGAGGAGTAAGGCAAAGACCATGGGGAAAATGGGCAGCTGAAATAAGAGATCCTAAGAAAGGAGCAAGAGTGTGGCTTGGCACCTTTGAGACAGCTGAAGCTGCAGCTACTGCTTATGATGAAGCTGCATTGAGGTTCAAAGGAAATAAAGCCAAGCTCAATTTCCCTCACCTCATTTCTCCTGCTTTGCCACCTTCTAATCCATTGCCACCGCGTAATGACAATAATGCGTCATCTTCAACTTCTTCTTCGCAGTTTGCTCCACCAAAGCCTCTTTTTTCGTTATCATCATCGGGAGAAGTGTTCCCAAACCTAATGCAATATGCGCAAGTGCTTTGTAGTAAGGATGATGAAGATCTTCGACGTGCTGCTTCAAGTCTTTACAATAATAATCATCAACAATATAATCACAATAATATTACTAATAGTAATGAGAGATTTCGTTATTATAATTTACCGCCATTTCTCTCAACACCATCAACAATATCACCGTCTTCTACTTCTACTTCTGAGGATGTTGTGCCTAGGGTTGGAGATTGTCGTCCTTTTAATAGAGGAAGTGGTTTTGACCAAAGGAATACGAGAGGAACATAG 654 0.4021 MERKEPSQPPNQGNEKKKHYRGVRQRPWGKWAAEIRDPKKGARVWLGTFETAEAAATAYDEAALRFKGNKAKLNFPHLISPALPPSNPLPPRNDNNASSSTSSSQFAPPKPLFSLSSSGEVFPNLMQYAQVLCSKDDEDLRRAASSLYNNNHQQYNHNNITNSNERFRYYNLPPFLSTPSTISPSSTSTSEDVVPRVGDCRPFNRGSGFDQRNTRGT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3666 217 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Mal8g3666 217 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2 8 191 - -
Mal8g3666 217 PANTHER DNA-BINDING DOMAIN 8 191 IPR044808 GO:0003700|GO:0009873
Mal8g3666 217 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mal8g3666 217 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Mal8g3666 217 MobiDBLite consensus disorder prediction 1 18 - -
Mal8g3666 217 MobiDBLite consensus disorder prediction 82 110 - -
Mal8g3666 217 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Mal8g3666 217 MobiDBLite consensus disorder prediction 180 217 - -
Mal8g3666 217 MobiDBLite consensus disorder prediction 1 26 - -
Mal8g3666 217 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Mal8g3666 217 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Mal8g3666 217 MobiDBLite consensus disorder prediction 92 110 - -
Mal8g3666 217 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mal8g3666 217 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3666 Mal-Chr8 106271952 106273567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3666 10 148 AP2-EREBP Transcription Factor Family AT5G13330 50.000 2.52e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g3666 AP2 4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3666 - - mtr:MTR_6g033255 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3666 8 106271952 106273567 Mal8g3666 8 106271952 106273567 ECH