Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3657 ATGAAGAATGGAAAATCTCTTTCAGAAAGCTGTGAAAACTTCAAGAAGAAACAAGATTCTGATGCATCGGTGAAGAAACCAAATATGATGAAGAGAAAATCTCATTCAGAAAGTTATGATGAAAAGAAGAAGAAGAGGAAACAAGATTCCGATGAAAAGAAGGAGAAACACCACTCATATTCGGCGTCACTAGTGATAAAAGATCAGTCGGAACACGATTCTGATGCAAAGGAGAAGAAACCAAATATAATGAAGAGAAAATCTCATTCAGAAAGTTATGATGAAAAGAAGAGTAAGAAAAAGAAACAAGATTCTGATGAAAAGAAGGAGAAGAAACCATTAATCCTTGATGATGAACCAGAAGAATTTATTGTGCAAAAGACTTATTGTGCATTCAAGGATTGTTCTGTTTTGTTGGTGAATGATAATGATGAGGGAGTGGTTTTGACTAGACGCGAGTGTCCGTCTTGTCATCGCCTATTCTGTGCACAATGTAAGGTTCCATGGCACGCGGAGATGAATTGTCAGGAGTTTCAACCCGATAAAAATGAAATAGATTTGGATAATAAGTTTTTGGAGTTGGCTAAAAGAATGAAGTGGCAGAGATGTCCAAATTGCTCTATCTATGTCGAGAAAAGCCATGGATTTCAAAACATCACATGCAGGTTAATTTGTTTTGCATTCTAA 687 0.361 MKNGKSLSESCENFKKKQDSDASVKKPNMMKRKSHSESYDEKKKKRKQDSDEKKEKHHSYSASLVIKDQSEHDSDAKEKKPNIMKRKSHSESYDEKKSKKKKQDSDEKKEKKPLILDDEPEEFIVQKTYCAFKDCSVLLVNDNDEGVVLTRRECPSCHRLFCAQCKVPWHAEMNCQEFQPDKNEIDLDNKFLELAKRMKWQRCPNCSIYVEKSHGFQNITCRLICFAF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3657 228 Gene3D - 172 227 - -
Mal8g3657 228 SUPERFAMILY RING/U-box 190 223 - -
Mal8g3657 228 MobiDBLite consensus disorder prediction 9 114 - -
Mal8g3657 228 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 125 224 IPR031127 GO:0004842|GO:0016567
Mal8g3657 228 SMART ibrneu5 113 175 IPR002867 -
Mal8g3657 228 SUPERFAMILY RING/U-box 127 181 - -
Mal8g3657 228 Pfam IBR domain, a half RING-finger domain 127 175 IPR002867 -
Mal8g3657 228 ProSiteProfiles TRIAD supradomain profile. 1 228 IPR044066 -
Mal8g3657 228 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 125 224 - -
Mal8g3657 228 MobiDBLite consensus disorder prediction 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3657 Mal-Chr8 106127309 106127995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3657 127 222 C3H Transcription Factor Family AT2G19610 31.429 1.14e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3657 K11975 - mtr:MTR_0777s0010 170.244