Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3656 ATGGATGGATTCAAACTTTTAGAGCATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGGAAAAATGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAATCCGGTGTCCAATGATGCTAATTACTCATCTTCTGCGAACGAAGGCAAGAGCTTAAAGAAGAGGAAGGATGAAGAAGATGAAGCAGATGAGAGGGATGATTGTTCGACATCAAAGAAGCCACGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGTTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCCGGGCTCACTAGAGAAAACGTTGCAAGCCATCTTCAGAAATACCGTTTGTGTCCACAAGATTCGATATTCTGA 432 0.4028 MDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLINPVSNDANYSSSANEGKSLKKRKDEEDEADERDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKVVPKKIMEMMNVPGLTRENVASHLQKYRLCPQDSIF* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3656 143 MobiDBLite consensus disorder prediction 59 82 - -
Mal8g3656 143 MobiDBLite consensus disorder prediction 47 82 - -
Mal8g3656 143 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 136 IPR006447 GO:0003677
Mal8g3656 143 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Mal8g3656 143 PANTHER TWO-COMPONENT RESPONSE REGULATOR 48 136 IPR045279 GO:0009736
Mal8g3656 143 SUPERFAMILY CheY-like 1 49 IPR011006 -
Mal8g3656 143 SUPERFAMILY Homeodomain-like 80 137 IPR009057 -
Mal8g3656 143 ProSiteProfiles Response regulatory domain profile. 1 59 IPR001789 GO:0000160
Mal8g3656 143 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 47 IPR045279 GO:0009736
Mal8g3656 143 Gene3D - 1 56 - -
Mal8g3656 143 PANTHER TWO-COMPONENT RESPONSE REGULATOR 48 136 - -
Mal8g3656 143 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 47 - -
Mal8g3656 143 Gene3D - 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3656 Mal-Chr8 105865036 105866226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3656 1 121 Response Regulator Gene Family AT4G16110 54.438 1.52e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal8g3656 Myb_DNA-binding 3.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3656 - K14491 mtr:MTR_2g034960 231.876