Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3618 ATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGTTTTTAGTCATGATTCCAGAAAAGACAAGAAAAGCAAGAAATCAAAGAAAAAAAGTACTCAAAAGGACTTAGAAGTGGAATCAGAAGAAGCACAAGTTGTTGTTCCACCAATAGAAGAAGTTAAATTGACTGAGGCAGAGAATGAACAAAATAAGCAAGCAATGTCGCTTGCTTATGCCACTGCTGCCGCGGCAGGGGCTGCTGTTGCTGCTGCTCAGGCTGCTTTCGAGGTTGTTCGTCTCACGAGTATGCCTCATCACCCCGCAAAGACTAAGGAAGAATTGGCTGCTATCAAAATTCAGACAGTGTTCCGCGGATATTTGGCAAGAAGAGCGTTGCGTGCCTTGAGAGGTTTGGTGAGGTTGAAGACATTGATACAAGGACAATCTGTAAAACGGCAAGCGGACAGCACCTTGAGATGCATGCAAACTATGGCAAGATTGCAATCACAGGTTCGCCAAAGGAGAATTCGAATGTCTGAAGAGAATCAGGCTCTACAGCGGCAACTACAACAAAAACATGAAAAAGAACTTGTGAAGTTCCAAGCTCCTCAGGTCGGAGAAGATTGGAATGATAGCTTGCAATCTAAGGAACAAATTGATGCAAAATTGTTGCAAAGGCAAGAAGCTGCTTTCAAAAGAGAGAGGGCTTTGGCTTATTCATTCTCACATCAGCAAACATGGAAGAATTCATCAAAATCTGTAAACCAAACATTTATGGATCCAAACAATCCTCACTGGGGATGGAGTTGGTTAGAGAGATGGATGGCGACTCGTCCGTGGGAAGGCGAAAGCATCATTATGAATCACAATGATCATGCATCTATTAAGACTCCATCATCAAAGCATAAGTATATTCTTCATTATGATAACAAACCTTCCCCGGGAAGCCAAAAGTCGAGAAGGCAAACTATTCACAATTCTCCTTCAACTTCCTCAAAGGCAAGACCATCAAACTCAAAGGGTGAAAGTAGTATCGATGACTCAAGAAGCATGTTTAGTGCTCAATCCGAACGGTATCGAAGATATAGTAGCATTGCAGGATCATCGGTAAGAGACGATGCAAGCGTTGAAAGCTCGCCGGTGTTTCCTAGTTACATGGCACTCACTAGTTCAGCAAAGGCAAAGTCTAGAGTAATGCAAAAAACATCACCATCACCATCTTCAATTTCTGCAAGGAAAAGGCTTTCTTTCCCTGCTTCTCCAGTTGGTTCAAGAAGGCACTCTGGTCCACCTAAGGTGGAATTATAA 1290 0.4279 MGKKGSWFSAVKKVFSHDSRKDKKSKKSKKKSTQKDLEVESEEAQVVVPPIEEVKLTEAENEQNKQAMSLAYATAAAAGAAVAAAQAAFEVVRLTSMPHHPAKTKEELAAIKIQTVFRGYLARRALRALRGLVRLKTLIQGQSVKRQADSTLRCMQTMARLQSQVRQRRIRMSEENQALQRQLQQKHEKELVKFQAPQVGEDWNDSLQSKEQIDAKLLQRQEAAFKRERALAYSFSHQQTWKNSSKSVNQTFMDPNNPHWGWSWLERWMATRPWEGESIIMNHNDHASIKTPSSKHKYILHYDNKPSPGSQKSRRQTIHNSPSTSSKARPSNSKGESSIDDSRSMFSAQSERYRRYSSIAGSSVRDDASVESSPVFPSYMALTSSAKAKSRVMQKTSPSPSSISARKRLSFPASPVGSRRHSGPPKVEL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3618 429 SMART iq_5 105 127 IPR000048 GO:0005515
Mal8g3618 429 Gene3D - 82 134 - -
Mal8g3618 429 MobiDBLite consensus disorder prediction 299 346 - -
Mal8g3618 429 MobiDBLite consensus disorder prediction 306 346 - -
Mal8g3618 429 MobiDBLite consensus disorder prediction 16 44 - -
Mal8g3618 429 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Mal8g3618 429 MobiDBLite consensus disorder prediction 384 429 - -
Mal8g3618 429 MobiDBLite consensus disorder prediction 384 408 - -
Mal8g3618 429 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Mal8g3618 429 Coils Coil 169 189 - -
Mal8g3618 429 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 428 - -
Mal8g3618 429 PANTHER IQ-DOMAIN 5-RELATED 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3618 Mal-Chr8 104864376 104866733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3618 1 428 IQD Protein Family AT5G03040 47.912 3.35e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3618 - - lja:Lj0g3v0301539.1 540.806