Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3595 ATGGAACAGAAACATGTTCTTTTGTCAGCATTGAGTGTTGGTGTTGGATTAGGTGTTGGACTTGGATTGAGTTCAGGACAAGCTGTTCAGAAATGGGTTGGAGGGAATCGCGATTTCGACGAGGTTTCTGGTGAGCAGATTGTGGAAGAACTTAAGAGACTTGTTGTTGATGGAAAAGATAGCAAAGTTACATTTGATGAGTTTCCTTATTACTTAAGCGAAAGGACTCGAATTTTGTTGACAAGTGCGGCATATGTTCATTTAAAACATCTTAATTTTTCCAAACACACAAGGAATCTCTCACCAGCAAGCAGGGCTATTTTACTTTCTGGTCCTGCAGAACTCTATCAGCAAATGCTTGCCAAAGCTTTAGCACATTACTTCGAATCAAAGTTACTATTATTAGATGTTACTGATTTCTCAGTGAAGTTGCAGAGCAGATTTGGATGTCCAAGAAAAGAACCATGTTTCAGAAGGTCAATATCCGAGCTGACTTTGGAACGAATGTCTGGTTTGTTTGGTTCTTTTTCAATGATGTCTTCAACCGGTGAAACTAGAGGAAATCTACGTCAACAAACCGTTGAAAGTTCGAGTAATCCTCCAAGGCTTCGGAGGAATGCCTCTGCTGCGTCTGATCTAAGTAGCTCTTCTTCCCAAAGTAGTTCAACAAATCCAGCTCCTTTGCGACGCACAAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTACAGTCACTATATAAGGTTTTGGTTTCTATCTCAGGAACTGATTCAATCATTTTATACATAAGGGATGTTGAGAAGCTTGTTCTCAAATCACCAAGGTTATATAATTTACTACAAAGAATGATAAATAAATTATCAGGCTCGGTGTTGATACTCGGTTCTCAGATATTAGATTTAGAATACGATTGCAAAGAATTGGATGAAAAGATCGCTAGGTTATTCCCTTATAACATTGAGATCAAAGCTCCCGAAGATGAAACTCATCTCGGTAGCTGGAAAGGCCAACTCGAAGAAGACATGAAAATCATTCAGTTTCAAGATACTCGAAACCACATTGCTGAAGTACTCGCGGAAAATGACATTGATTGCGACGACTTGAATTCAATATGTCATGCCGACACTATGATACTTAGTAATTATATTGAAGAAGTTGTTGTGTCCGCAATATCTTACCATTTGATGAGTACTAAGGAACCAGAATACCGAAATGGAAAGTTAGTTATCTCGGCAAATAGTTTGTCGCATGGATTGAGTCTATTCCAGGAAGGCAAGAGTAGTGGAAATCTGAAGACTAATGACTCTAATAAGGAAAATGTTGTTGACGATATTGCTGGTGCGAAGAATGATGTGCGGAGTGATAACCAAGCACCTGAAAACAAAAATGAGACAGAGAAATCCATCCCTGTAACTAAAAAAGAAGGCGAAAATTCTGCGCCTGCAAAAACAGAAGTTCCTGACAATGAGTTCGAGAAGCGAATTAGACCAGAGGTTATCCCTGCGAATGAGATAGGTGTTACATTCGCCGATATCGGTGCATTGGACGAGATAAAAGAATCACTTCAAGAGCTAGTAATGCTTCCCCTCAGAAGACCAGACCTCTTCAAAGGTGGACTTCTAAAGCCATGTAGAGGTATATTACTTTTCGGTCCACCTGGTACCGGAAAAACAATGCTAGCAAAGGCGATTGCGAATGAAGCAGGAGCTAGTTTCATTAACGTTTCGATGTCCACCATCACCTCAAAATGGTTCGGAGAAGATGAAAAGAATGTCCGAGCTTTGTTCACGCTAGCAGCTAAGGTTGCTCCTACGATTATATTCGTCGATGAAGTTGACAGCATGCTCGGTCAGCGTACTAGAGTCGGTGAACATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACATTGGGATGGACTATTGTCAGGACCTAATGAACAAATTCTTGTTCTCGCTGCTACCAACAGACCGTTTGATCTTGATGAAGCAATTATAAGACGGTTCGAGCGAAGGATCATGGTTGGTCTTCCAACTACTGAGAATAGGGAAATGATCCTTAAAACTCTTCTATCAAAGGAAAAACACGAAAACTTGGATTTTAAAGAGTTAGCAACCATGACAGAAGGATTTAGTGGAAGTGATCTAAAGAATTTGTGCATAACTGCGGCTTATCGACCTGTTAGGGAGTTAATACAGCAAGAAAGAAAGAAGGAAATGGAAAAGAAGAAAAAAGAGGCAGAAGGCGTAAGCTCGGAAGATGCTTCAAATAATAACGATAACGAGGAAACAGAAATTACATTGAGGTCTTTAAGCATGGAAGACATGAAACAAGCTAAGAATCAGGTGGCTGCAAGTTTTGCATCAGAAGGTTCAGTAATGGCTGAACTAAAGCAATGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAACAACTCACATACTTCCTTTAA 2460 0.3988 MEQKHVLLSALSVGVGLGVGLGLSSGQAVQKWVGGNRDFDEVSGEQIVEELKRLVVDGKDSKVTFDEFPYYLSERTRILLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGPAELYQQMLAKALAHYFESKLLLLDVTDFSVKLQSRFGCPRKEPCFRRSISELTLERMSGLFGSFSMMSSTGETRGNLRQQTVESSSNPPRLRRNASAASDLSSSSSQSSSTNPAPLRRTSSLCFDEKLFVQSLYKVLVSISGTDSIILYIRDVEKLVLKSPRLYNLLQRMINKLSGSVLILGSQILDLEYDCKELDEKIARLFPYNIEIKAPEDETHLGSWKGQLEEDMKIIQFQDTRNHIAEVLAENDIDCDDLNSICHADTMILSNYIEEVVVSAISYHLMSTKEPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNDSNKENVVDDIAGAKNDVRSDNQAPENKNETEKSIPVTKKEGENSAPAKTEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLSGPNEQILVLAATNRPFDLDEAIIRRFERRIMVGLPTTENREMILKTLLSKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIQQERKKEMEKKKKEAEGVSSEDASNNNDNEETEITLRSLSMEDMKQAKNQVAASFASEGSVMAELKQWNDLYGEGGSRKKQQLTYFL* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3595 819 SMART AAA_5 542 679 IPR003593 -
Mal8g3595 819 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 819 - -
Mal8g3595 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 372 IPR027417 -
Mal8g3595 819 MobiDBLite consensus disorder prediction 182 228 - -
Mal8g3595 819 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 819 - -
Mal8g3595 819 Coils Coil 728 748 - -
Mal8g3595 819 MobiDBLite consensus disorder prediction 736 751 - -
Mal8g3595 819 Gene3D - 505 677 IPR027417 -
Mal8g3595 819 Pfam ATPase family associated with various cellular activities (AAA) 546 676 IPR003959 GO:0005524|GO:0016887
Mal8g3595 819 MobiDBLite consensus disorder prediction 736 763 - -
Mal8g3595 819 CDD AAA 544 677 - -
Mal8g3595 819 Pfam AAA+ lid domain 698 741 IPR041569 -
Mal8g3595 819 MobiDBLite consensus disorder prediction 446 491 - -
Mal8g3595 819 ProSitePatterns AAA-protein family signature. 649 668 IPR003960 GO:0005524|GO:0016887
Mal8g3595 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 734 IPR027417 -
Mal8g3595 819 Gene3D - 678 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3595 Mal-Chr8 104227227 104233403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3595 472 735 Calmodulin-binding Proteins AT3G56690 36.630 1.41e-41 162