Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3579 ATGGCATCACTAAACCAACAAGCCAAATATGATCTTGAGCAAAATTCAACAACTCTAGAAGTTGAAACAAAAGATTTTGACTACTCAAAAAGATCACAATGGCTACGAGCCGCAGTTTTAGGAGCTAACGATGGATTAGTCTCTACAGCTTCGCTAATGATGGGTGTCGGCGCAGTCAAGCAAGACATCAAAGCAATGATCTTGACCGGTTTTGCTGGGTTAGTAGCCGGTGCTTGCAGCATGGCAATAGGTGAATTTGTCTCTGTATACTCACAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGAGGTAGAGAAATTGTTGATGGTGAAGAGAAAGAAAGTTTGCCTAATCCTTTACAAGCTGCAGCAGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGGGATTATAAGGTGAGGGTTGGTGTTGTTGTAGTAGCAGTTACTTTTGCTTTGGTTGTTTTTGGTTGGTTAGGGGCTGTGTTGGGTAAAGCTCCAATTTTTAGGTCTATGTTGAGGGTTTTGTTTGGTGGTTGGATGGCTATGTCCATTACTTTTGGGCTTACAAAATTGATTGGGTCAAGTGGACTTTAG 633 0.406 MASLNQQAKYDLEQNSTTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGREIVDGEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRVGVVVVAVTFALVVFGWLGAVLGKAPIFRSMLRVLFGGWMAMSITFGLTKLIGSSGL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3579 210 CDD Nodulin-21 33 179 - -
Mal8g3579 210 Coils Coil 97 117 - -
Mal8g3579 210 Pfam VIT family 35 110 IPR008217 GO:0005384|GO:0030026
Mal8g3579 210 Pfam VIT family 116 202 IPR008217 GO:0005384|GO:0030026
Mal8g3579 210 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 207 - -
Mal8g3579 210 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 207 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3579 Mal-Chr8 103432327 103432959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3579 1 210 Nodulin-like Gene Family AT3G43660 69.524 6.09e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3579 K22736 - gmx:100815165 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3579 8 103432327 103432959 Mal1g2149 1 28310485 28311141 PCT