Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3540 ATGGAAGGGAATTTATCACAAGGAGGTATAGTTCAAGGTGGTGGTGGTGGTAGTGGTAGTGGTTCTTTTGGTGGTTTTGATTTGCCGGGATCGATGCGAGTTCATCGTCAAGCGCAGCATCCACATACAATAAACCAACATGAAACTCATCCATGTCAAGGGCCGTCGGTTCATGAGGGTTTTCCTCTTACAATGGGGACATTGCAGAATTGTGATCAGACGATATCGATGAATGAGTTTAGTCACGGAGAAAGAAGCAAAAACTCGGGGAGTGAGGAAGACGAGCCGGAGGAAGGGGTTAGAGGGAAAAAGGGGTCTCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTCTGATAACGGCTGTGTCTTATATTGGTGAGGATGGGAATTCTGAAGGTGGTGGTGGAGGAAGGAGGAAATTTGCGGTGTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGTGAGGATAAATTCAACGATCTTAATAAAAGGTATAAAAGGCTTAATGATATGCTTGGAAGGGGAACTTCCTGTCAAGTTGTTGAAAATCCGGCTTTGCTGGATGTAATCGAATTTCTTAACGAGAAAGAAAAGGATGATGTTAGAAAAATATTAAACTCGAAACATCTTTTTTATGAAGAAATGTGTTCCTACCATAATTGTAATAGATTGCATCTACCGCACGATCCTGCATTGCAACGGTCCCTGCAGATAGCTCTCCGAAATAGAGATGATCATGATAACGATGATGTAAGAAGGTCCTATCATGATGATCATGACGAGGATGATCATGATATGGAAACTGACGATCATGATGAGTTTGAAGAGAATTATGCTTCCCATGGTGATAGTCGAGGAATCTTTGGGGGATTGGGAGGAACTTCGAAAAGACTAAGACAAGGTCAAGGCCAAGAAGATGCTACTACTTTCGGGAATTCTTTGAATAGTCAGGAGCACAATAAAGGTTGCTATCCTCATGGGCAGATAGTACAACCTGACGGAAATCAAGCTTTACCTGAAAACATGAGAGCAGCTTGGTTACAGAAGCAATGGATTGAATCTCGCTCGGTTCAGTTAGAAGAACAGAAGCTACAAATTCAGATTGAGATGATGGAATTAGAGAAACAAAGATTCAAGTGGGAGAGGTTTAGCAAGAAAAAAGACCGAGAGTTGGAGAAGTTCAAGCTGGAGAATGACAGAATGAAGATTGAGAATGAACGGATTGCTTTAGAACTAAAGCAAAAGGAGATCGGTGGCACCAGCTTTAACTAG 1326 0.4231 MEGNLSQGGIVQGGGGGSGSGSFGGFDLPGSMRVHRQAQHPHTINQHETHPCQGPSVHEGFPLTMGTLQNCDQTISMNEFSHGERSKNSGSEEDEPEEGVRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGNSEGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIEFLNEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDDHDMETDDHDEFEENYASHGDSRGIFGGLGGTSKRLRQGQGQEDATTFGNSLNSQEHNKGCYPHGQIVQPDGNQALPENMRAAWLQKQWIESRSVQLEEQKLQIQIEMMELEKQRFKWERFSKKKDRELEKFKLENDRMKIENERIALELKQKEIGGTSFN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3540 441 PANTHER F16F4.11 PROTEIN-RELATED 1 436 - -
Mal8g3540 441 Pfam Myb/SANT-like DNA-binding domain 110 236 IPR044822 -
Mal8g3540 441 Gene3D - 113 185 - -
Mal8g3540 441 MobiDBLite consensus disorder prediction 1 64 - -
Mal8g3540 441 Coils Coil 374 394 - -
Mal8g3540 441 MobiDBLite consensus disorder prediction 81 107 - -
Mal8g3540 441 MobiDBLite consensus disorder prediction 264 290 - -
Mal8g3540 441 MobiDBLite consensus disorder prediction 264 279 - -
Mal8g3540 441 Coils Coil 402 431 - -
Mal8g3540 441 MobiDBLite consensus disorder prediction 85 107 - -
Mal8g3540 441 PANTHER FACTOR, PUTATIVE-RELATED 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3540 Mal-Chr8 100839098 100840423 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal8g3540 Myb_DNA-bind_4 7.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3540 - - mtr:MTR_6g035315 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3540 8 100839098 100840423 Mal1g2155 1 28374649 28376001 PCT