Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3535 ATGCTAGGGGACTCAGCAGTGATGGGAACAGGAGGAGGAAGCTCAGGAGATGGAGGAGGAGCTTACCATGACGGCGGTGACATGGCGGCAGGTGGTGGTGGATCAGTTTCAGGTGATGATGAAAGAGGGGGTGGAGGTAGAAATGAAGAGGGTGTGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACACTTGCTTTGTTGAAGATAAGGTCTGATATGGGTGTTGCTTTTAGAGATGCAAGTGTTAAAGGTCCCTTATGGGATGAAGTTTCAAGGAAAATGGCAGATCTTGGGTATCAAAGAAACTCCAAAAAATGCAAAGAAAAATTTGAGAATGTTTTCAAATATCACAAGAGAACCAAAGAAGGGAGAGGTGGAAAATCAGATGGTAAAACTTATAGATTTTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATGCATCAATCACCAACACAAACACCTTCAACAAATCCACCACAATTGAACACTCCACCATTACCTCAAACTAGTACTATTCCCACCCCTACAACAATAGCTCCATTTCTATCTGCACCTCCATTGTTAAACTCCACACCTCCTAATACTACTATTCCCACCCCTTCCACCACTACTGTTCCATCAACAACTACAACTACACTTCCAATTCCAATGGCTTACACACCATCCAACCCTACACATTTTCCACCACCACCACCAACAAACCCTACAAATAACCCACTTCCTCAAATTACTATAGCACCCCCACCATCTTCATTCCCCAACATTTCAACAGATTTCTTCTCGATTTCAAGTTCATCTTCAACTTCTTCAGAGGAAACTACAACAATGGAAGGCGGATCAAACCGGCGGAAGAGGAAGAGGAAATGGAAGGATTTCTTTGATAGACTAATGAAAGAGGTTGTTGAGAAACAAGAGGAGCTGCATAAGAGGTTCTTGGAATCCATAGAGAAAAGAGAAAGAGAGAGAAGTGCTAGAGAAGAAGCTTGGAGGTTGCAAGAGATGCAAAGGATTAATAGAGAAAGGGAAATTCTTGCTCAAGAGAGATCTATTGCTGCTGCTAAAGATGCTGCTGTTATGGCTTTTTTGCAAAAGATTGCTGAACAACAAGATCAACAAAATCTTGTTCCTCCTGCATTGAACAACAACACCATCATTCCTCAACAACAACAACAACAAGCGCCACCAGAAACTACACCGACCCCAACGCCGACACCAACACCATTGTCAACAGCAGCGGCACCATTGCCAACAACAGCGGCGCCTTTGCCAATACCAATACCGACACCAACACCACAGCAAGTTCAAACTCCAGCTGCAATTGTGCAACAAACAACATCAGTCATTCCGCAGACTTCACCGTTGCCGCAACATCAGCAGCAGCAACATCAGGTTCAGGTTCAACAGCAGCAAGTAACAAATATGGATATTGTGAAAAGTGACAACAATGGTGAGAGTATGATGCATGCAAGTTCTTCTAGGTGGCCAAAAACTGAGGTTGAGGCATTGATAAAGCTGAGAACAACTCTTGATATGAAGTATCAAGAAAATGGACCTAAAGGGCCATTATGGGAGGAGATTTCAGGGTTGATGAAGAAAATGGGGTACAACAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAGGAAAGCAACAAGAAGAGGCCGGAGGATTCGAAGACATGTCCTTATTTTCACCAGCTGGATGCGCTATACAGGCAGAAGAACAAGGTGGAGGGGACATCCACTACATCGAGGCCTGAGGGAACGATGATGGCGCCTTTGATGGTTCAGCCGGAGCAGCAATGGCCTCCACAGCAGCAACCTCCACCAGCAGCTGGGGCGGATGTTACAATGCAGGATGCTGAGAATGACCGGCCGGCCCGTGATGAGGAAGAGTATTATGACGATGATGACGGTGACGATGAAGAAGAGGATGATGAAGGAAGTGACAACTATGAAGTGGTTGCCAACAAACCACCACCACCTCAATAA 2034 0.4454 MLGDSAVMGTGGGSSGDGGGAYHDGGDMAAGGGGSVSGDDERGGGGRNEEGVDRSFGGNRWPRQETLALLKIRSDMGVAFRDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVFKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSMHQSPTQTPSTNPPQLNTPPLPQTSTIPTPTTIAPFLSAPPLLNSTPPNTTIPTPSTTTVPSTTTTTLPIPMAYTPSNPTHFPPPPPTNPTNNPLPQITIAPPPSSFPNISTDFFSISSSSSTSSEETTTMEGGSNRRKRKRKWKDFFDRLMKEVVEKQEELHKRFLESIEKRERERSAREEAWRLQEMQRINREREILAQERSIAAAKDAAVMAFLQKIAEQQDQQNLVPPALNNNTIIPQQQQQQAPPETTPTPTPTPTPLSTAAAPLPTTAAPLPIPIPTPTPQQVQTPAAIVQQTTSVIPQTSPLPQHQQQQHQVQVQQQQVTNMDIVKSDNNGESMMHASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLMKKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKNKVEGTSTTSRPEGTMMAPLMVQPEQQWPPQQQPPPAAGADVTMQDAENDRPARDEEEYYDDDDGDDEEEDDEGSDNYEVVANKPPPPQ* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3535 677 MobiDBLite consensus disorder prediction 193 224 - -
Mal8g3535 677 ProSiteProfiles Myb-like domain profile. 491 555 IPR001005 -
Mal8g3535 677 Gene3D - 61 122 - -
Mal8g3535 677 Gene3D - 499 560 - -
Mal8g3535 677 ProSiteProfiles Myb-like domain profile. 59 117 IPR001005 -
Mal8g3535 677 MobiDBLite consensus disorder prediction 643 664 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 423 437 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 267 291 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 148 253 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 1 60 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 612 677 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 392 444 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 267 281 - -
Mal8g3535 677 SMART sant 57 119 IPR001005 -
Mal8g3535 677 SMART sant 495 557 IPR001005 -
Mal8g3535 677 Coils Coil 306 326 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 401 415 - -
Mal8g3535 677 PANTHER - 1 670 - -
Mal8g3535 677 Pfam Myb/SANT-like DNA-binding domain 497 584 IPR044822 -
Mal8g3535 677 Pfam Myb/SANT-like DNA-binding domain 59 145 IPR044822 -
Mal8g3535 677 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 670 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 162 176 - -
Mal8g3535 677 CDD GT1 59 124 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 42 56 - -
Mal8g3535 677 MobiDBLite consensus disorder prediction 226 253 - -
Mal8g3535 677 CDD GT1 497 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3535 Mal-Chr8 100411330 100414513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3535 476 616 Trihelix Transcription Factor Family AT1G76880 66.234 2.27e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal8g3535 Myb_DNA-bind_4 7.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3535 - - gmx:547624 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3535 8 100411330 100414513 Mal1g2157 1 28402285 28405113 PCT