Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3483 ATGGCTTTTCAATCGTTCTCCTCTTCCTCCTCCTTCTCCTACGGATTCACGTATGATGTTTTCCTAAGTTTTTTTGGCGATGACACTCGCTTTCATTTTACTGGTAATCTATACAAAGCTCTATGTGACAAGGGAATCCGTGTCTTCATTGATGACAGGGAGCTTCATAGAGGTGACGAAATCACACCATCACTTATCAAGGCAATTGAAGACTCGAGGATTGCAATCCCCGTGTTTTCCAAGAAATATGCATTTTCTTCGTTTTGTTTGGATGAACTTGTCAACATCATTGATTGCTTCAAGGCAAAGGGTCGACTTGTTTTACCGGTGTTCTATGACGTCGAGCCTTCTCACGTGCGACATCAAACTGGGAGTTATGGTGAAGCTATAGCTATGCATGAAGCAAGGTTCAAAAACAACAAAGAAATGTACATAAATAACATGAATAGACTGCAGAAATGGAAGATGGCTCTTAATCAAGCTGCTAACCTCTCCGGTTATCATTTCAATCATGGCAATGAATATGAACACGAGTTTATTGGAAGGATAGTGAAAGAGGTATCCAAGAAGATCAATCGTGCATTGTTACACGTTGCTGATTACGTTGTTGGATTGGAGTCTCGTTTGCTACAAGTAAATTCGCTACTAGGTGTCGGATCCAATAACGGAGTGTTAGTGGTTGGGATCCATGGAATTGGAGGAATTGGTAAAACAACACTTGCACGAGCAATTTATAATTTGATTGCTGATCAATTTGAATGTTTATGTTTTCTTCATGAGGTGAGAGAAAATTCATCTAAACATGGTTTAGAACATCTTCAAGAAAGGCTCCTTTCCAAAACCATTGGATTAAACATTAAGTTAGGACATGTTAGTGAAGGAATTCCAATAATAAAACAAAGGCTACAACAAAAGAAGGTGCTTTTGGTTCTCGATGATGTTGATGAACAAAAGCAATTGCAAGTTATGGTTGGAGAGCCTGGTTGGTTTGGTCCTGGAAGTAGAGTCATAGTTACCACTCGAGACAAACACTTGCTAACAAGTCATGGTATTGATAGAATATATGAAGTAGATGGGTTAAATGGAAAAGAAGCTCTAGAATTGTTGATGTGGAAAGCTTTTAAAAATAACAAAGTAGATTCGAGTTTCGAGTACATTTTAAAATGTGTTGTAAATTATGCTTCTGGCCTTCCACTAGCTTTAGAAGTAGTGGGATCTAACTTGTTTGGAAAGAATATAGAAGAATGGAAATCTACATTTGATCGATATGAATGGATTCCTGATAAAGAGATTCAAAAAATACTTAAAGTAAGTTTTGATGGTTTGGAGGAAGATGAAAAGAGTGTTTTTCTGGACATTGCTTGTTGCTTCAAAGGATATGATTTGGCAGAGGTTGAATTTATACTTTGTGCTCATTATGGTCAATGCATAAAATATCATATTGGAGTGTTGGTTGAAAAATCCCTCATAAAGATTAATCAATGGGGTTATGTGACATTGCATCACTTGATAGAGGACATGGGTAAAGAAATTGTCCGAAAAGAATCACCAAAACATCCTGGTAAGCGTAGTAGATTGTGGTTTCATGAAGATATAGTTCAAGTTTTAGAAGAAAATACGGGAACAAAAGAAATTGAAATTGTATATCTAGATTTCCCGTTATTTGAAGAAGTGGTTGAATGGAAAGGAGATGAGTTCAAGAAGATGATAAACCTCAAAACACTTATTATTAAGAATGGTCACTTTTCCAAAGGACCAAAACATCTTCCAAATAGTTTAAGAGTGCTTGAATGGCATAGATATCCTTCACTGAGTATACCTTCAAACTTTTATCAAAAGAAACTTTCCATATGCAAGTTAGGTGAAAGTTGCTTTACCACATTTGGGTTTCATGGCTCATTGAAGAAGTTCGTGAATATGAGAGAGTTAAATCTAGACAATTGTAAATATTTGACACATATATTTGACGTATCTCGTCTCCCAAATTTAGAAAAAATTTCATTTCGGCATTGTGAGAATTTAATGACGATTGATAGTTCTGTTGGATTGCTAAATAAACTTAAAATCTTAAGAGCTGATGGTTGCTTAAAACTCATGAGCTTTCCACCCATGGAATTGACGTCTCTTCAACGGTTAGAACTTTCATTTTGTGATAGTCTCGAATGTTTTCCTGAAATTTTAGGAGAGATGGGAAATATAACAGAGATTGTTTTGGAGGGAACTTCAATCGAAGAATTGTCATATTCATTTCAAAATCTCACCGGGCTTCGGAAGTTACAAATACGGGGGAGTGGAATACTTAAATTACCAAGTAACATTCTCATGATGCCAAAATTGTCATATATACTTGTTGAGGGTATTCAATTATTTCCAAACATGAATGATAATCTGAGTTCCTCGACGTCTTCAAACGTAGATATTCTTCGACTCCCAAATTGCAACTTGTCAAATGAGTTTCTCCAAACAAGTCTCACATGGTTTGCTAATGTCATACATTTAGACCTATCGCGGAATAGTTTCACAATACTTCCAGAATTCATCAAAGAATGTCGATTTTTAATTACGCTTAATTTGAATGACTGCACATGTCTTCGAGAAATTAGAGGGATTCCTCCAAATTTAAAACGTTTGTCTGCATTGCACTGTGAATCTTTGTCTTCCTCATGTAGAAGCATGCTACTGAATGAGGAATTGCATGAAGCTGGAAGCACGGATTTTTGTTTACCAGGAACTTCGCCGATTCCAGAGTGGTTTCACCACCAAAGTAGAGGATCTTCAATTTCTTTTTGGTTTCGTAACAACATCCCTTCCGTCGCTCTCTTTGTTGCTATAAAACCAATGCATAATGAGTGCCTCGGTGATGGATTTCTTCCTTTAGCAACAATCAGTTTGACCATCAATGACTATAAATTTGATCTTCGTTGTCCGCCTGATGGTATTCGTCTCATGATGTCGTTAGGTCATACATATCTATCTGATATGCAACTACAAGAAATGGAACTCGAATCTAAATTGGAAAAGGCACTTTTGAGAAATGAGTGGGTTCATGTAGAGGTTTTGCTTAAGCATCAGATGAAGAAAACACTCCTTATAGAAAATGGAATCCACTTGTTCAAGCAGAAAAATAGCATGGAGGATATCCAATTTAGCAATCCTTATAAAAAGAGAAAATTTGATGACGACGATGATGATGACAACTTTTCATTGCAGTTCAAATCGAGCGACAAATTCACCCACTAG 3240 0.3654 MAFQSFSSSSSFSYGFTYDVFLSFFGDDTRFHFTGNLYKALCDKGIRVFIDDRELHRGDEITPSLIKAIEDSRIAIPVFSKKYAFSSFCLDELVNIIDCFKAKGRLVLPVFYDVEPSHVRHQTGSYGEAIAMHEARFKNNKEMYINNMNRLQKWKMALNQAANLSGYHFNHGNEYEHEFIGRIVKEVSKKINRALLHVADYVVGLESRLLQVNSLLGVGSNNGVLVVGIHGIGGIGKTTLARAIYNLIADQFECLCFLHEVRENSSKHGLEHLQERLLSKTIGLNIKLGHVSEGIPIIKQRLQQKKVLLVLDDVDEQKQLQVMVGEPGWFGPGSRVIVTTRDKHLLTSHGIDRIYEVDGLNGKEALELLMWKAFKNNKVDSSFEYILKCVVNYASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPDKEIQKILKVSFDGLEEDEKSVFLDIACCFKGYDLAEVEFILCAHYGQCIKYHIGVLVEKSLIKINQWGYVTLHHLIEDMGKEIVRKESPKHPGKRSRLWFHEDIVQVLEENTGTKEIEIVYLDFPLFEEVVEWKGDEFKKMINLKTLIIKNGHFSKGPKHLPNSLRVLEWHRYPSLSIPSNFYQKKLSICKLGESCFTTFGFHGSLKKFVNMRELNLDNCKYLTHIFDVSRLPNLEKISFRHCENLMTIDSSVGLLNKLKILRADGCLKLMSFPPMELTSLQRLELSFCDSLECFPEILGEMGNITEIVLEGTSIEELSYSFQNLTGLRKLQIRGSGILKLPSNILMMPKLSYILVEGIQLFPNMNDNLSSSTSSNVDILRLPNCNLSNEFLQTSLTWFANVIHLDLSRNSFTILPEFIKECRFLITLNLNDCTCLREIRGIPPNLKRLSALHCESLSSSCRSMLLNEELHEAGSTDFCLPGTSPIPEWFHHQSRGSSISFWFRNNIPSVALFVAIKPMHNECLGDGFLPLATISLTINDYKFDLRCPPDGIRLMMSLGHTYLSDMQLQEMELESKLEKALLRNEWVHVEVLLKHQMKKTLLIENGIHLFKQKNSMEDIQFSNPYKKRKFDDDDDDDNFSLQFKSSDKFTH* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3483 1079 SUPERFAMILY "Winged helix" DNA-binding domain 429 537 IPR036390 -
Mal8g3483 1079 Gene3D - 190 352 IPR027417 -
Mal8g3483 1079 SMART AAA_5 223 360 IPR003593 -
Mal8g3483 1079 Coils Coil 991 1011 - -
Mal8g3483 1079 Gene3D Ribonuclease Inhibitor 543 727 IPR032675 -
Mal8g3483 1079 Gene3D - 13 189 IPR035897 -
Mal8g3483 1079 PRINTS Disease resistance protein signature 226 241 - -
Mal8g3483 1079 PRINTS Disease resistance protein signature 301 315 - -
Mal8g3483 1079 PRINTS Disease resistance protein signature 394 408 - -
Mal8g3483 1079 PRINTS Disease resistance protein signature 704 720 - -
Mal8g3483 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1020 IPR044974 GO:0006952
Mal8g3483 1079 ProSiteProfiles TIR domain profile. 16 191 IPR000157 GO:0007165
Mal8g3483 1079 Pfam TIR domain 18 192 IPR000157 GO:0007165
Mal8g3483 1079 SMART till_3 17 164 IPR000157 GO:0007165
Mal8g3483 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 167 IPR035897 -
Mal8g3483 1079 Gene3D Ribonuclease Inhibitor 728 901 IPR032675 -
Mal8g3483 1079 PANTHER ARCHAEAL ATPASE 28 1020 - -
Mal8g3483 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 453 IPR027417 -
Mal8g3483 1079 Pfam NB-ARC domain 219 422 IPR002182 GO:0043531
Mal8g3483 1079 SUPERFAMILY L domain-like 559 905 - -
Mal8g3483 1079 Gene3D - 359 443 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3483 Mal-Chr8 98932675 98938041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3483 12 842 WRKY Transcription Factor Family AT4G12020 29.814 2.65e-80 286