Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal8g3441 | ATGAGAGGAACAAGGGGTTGGACCGCCTTATGTTTGAACCGACTGACCCATACTTCTACGTACTCACTCTTTCTTGTTCTTTGGTATGCAGAGGCACAACCAAAACTTTGTCGAAGATACAGCACAAAATGGAGAGGGATATGTTCAGACACGGGAATCTGTAAAGATGCGTGCAACACCTTAGAACAAGCTGCTTTTGGAGCATGTCACCTTGATGGAATTGGATTTGCTTGCTTCTGTTACTTCAACTGCTAA | 255 | 0.4392 | MRGTRGWTALCLNRLTHTSTYSLFLVLWYAEAQPKLCRRYSTKWRGICSDTGICKDACNTLEQAAFGACHLDGIGFACFCYFNC* | 85 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal8g3441 | 84 | Pfam | Gamma-thionin family | 35 | 84 | - | - | |
| Mal8g3441 | 84 | SMART | gth_4 | 36 | 84 | IPR003614 | GO:0006952 | |
| Mal8g3441 | 84 | SUPERFAMILY | Scorpion toxin-like | 35 | 84 | IPR036574 | - | |
| Mal8g3441 | 84 | Gene3D | - | 36 | 84 | IPR036574 | - | |
| Mal8g3441 | 84 | PANTHER | DEFENSIN-LIKE PROTEIN 18-RELATED | 22 | 84 | - | - | |
| Mal8g3441 | 84 | ProSitePatterns | Gamma-thionins family signature. | 35 | 58 | IPR008176 | GO:0006952 | |
| Mal8g3441 | 84 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 22 | 84 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal8g3441 | Mal-Chr8 | 96625766 | 96626263 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal8g3441 | 22 | 84 | Plant Defensins Gene Families | AT1G19610 | 43.077 | 9.92e-13 | 56.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal8g3441 | - | - | mtr:MTR_8g012775 | 76.2553 |