Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3413 ATGTCAGTTAAGGTGTATGAGCTGAGGAGCAAAACAAAGGCTGATTTTCTTAATCAGCTGAAGGATCGCAAGGCGGAGCTGGCTTTGCTCCGAGTTGCCAAAGTCACCGGCGGTGCACCTAACAAGCTTTCCAAAATTAAAGTTGTGAGGCTTTCAATTGCACAAGTGTTGACAGTGATTTCACAAAAGCAGAAAGCAGCACTCAGAGAGGTTTATAAGAATAAGAAATATTTGCCACTTGATCTTCGTCCCAAGAAGGCTCGTGCTATTCGAAGACGCCTTACCAAACATCAGGTTTTGCTTTTTGGGATTTTTGTAAGTATGGTGAATGAATGTTTCTTTCCTTTTCTTTGTTCTGCCACGCCATTCCTTTACTTTCCCATTTTCTTTCTTTCTTTATTTCTTTTTCTTCAATTGGATTTTTTTGGATAA 432 0.3981 MSVKVYELRSKTKADFLNQLKDRKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKARAIRRRLTKHQVLLFGIFVSMVNECFFPFLCSATPFLYFPIFFLSLFLFLQLDFFG* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3413 143 Gene3D - 77 111 - -
Mal8g3413 143 SUPERFAMILY Ribosomal protein L29 (L29p) 3 64 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mal8g3413 143 PANTHER 60S RIBOSOMAL PROTEIN L35 3 101 IPR045059 GO:0000463|GO:0022625
Mal8g3413 143 TIGRFAM L29: ribosomal protein uL29 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3413 143 CDD Ribosomal_L29_HIP 7 63 - -
Mal8g3413 143 Gene3D - 1 76 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mal8g3413 143 Pfam Ribosomal L29 protein 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3413 143 Hamap 50S ribosomal protein L29 [rpmC]. 3 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3413 143 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3413 Mal-Chr8 95567586 95568958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3413 3 116 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 74.561 2.84e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3413 K02918 - gmx:100306624 171.785