Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3412 ATGTCAGTTAAGGTGTATGAGCTGAGGAGCAAAACAAAGGCTGATTTTCTTAATCAGCTGAAGGATCGCAAGGCGGAGCTGGCTTTGCTCCGAGTTGCCAAAGTCACCGGCGGTGCACCTAACAAGCTTTCCAAAATTAAAGTTGTGAGGCTTTCAATTGCACAAGTGTTGACAGTGATTTCACAAAAGCAGAAAGCAGCACTCAGAGAGGTTTATAAGAATAAGAAATATTTGCCACTTGATCTTCGTCCCAAGAAGGCTCGTGCTATTCGAAGACGCCTTACCAAACATCAGGAAAAAAAGAAAAAAATGTTTTTTAATTGA 324 0.4136 MSVKVYELRSKTKADFLNQLKDRKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKARAIRRRLTKHQEKKKKMFFN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3412 107 Pfam Ribosomal L29 protein 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3412 107 PANTHER 60S RIBOSOMAL PROTEIN L35 3 106 IPR045059 GO:0000463|GO:0022625
Mal8g3412 107 Gene3D - 77 104 - -
Mal8g3412 107 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 3 106 - -
Mal8g3412 107 TIGRFAM L29: ribosomal protein uL29 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3412 107 CDD Ribosomal_L29_HIP 7 63 - -
Mal8g3412 107 Hamap 50S ribosomal protein L29 [rpmC]. 3 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mal8g3412 107 Gene3D - 1 76 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mal8g3412 107 SUPERFAMILY Ribosomal protein L29 (L29p) 3 64 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3412 Mal-Chr8 95547946 95550047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3412 3 106 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 79.279 1.31e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3412 K02918 - gmx:100305671 176.022