Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3384 ATGCATAGTTCAAATAATACGGTGGATTGTGTTACTATTGATGATGAAGTTTTAGAAGTTGACAACTTTAAATATGATTCTGCGCGTTGGGTTCCTTCAACAGAGATGTGTTTTTCTTCCTTAGATGACGTTAAATGTTTTTATGGAGAGTATGCTTTGAGAAAGGGTTTTAGGTGGAAGATTAGAACATCAAGAAAAGGAAACGATGGAGAAATATGTTACTTAATGCTAGCATGCACAAGAGAGGGGTCTACAGTTTCAAAGATTTCGTGTACATTGAAGACACTTCCGACACAGGTGAAAAATTGTCCTACTAAGATTTGTATGAAGTTGGAAAAGGATGGATTGTGGTACATTAAAAAATTTGACCCAAACCATTCTCATGAGTGTAGCCCTACGAAGTCAAGGTTGTTCAAGGCTAACAAGAAAATGAACATGCATGTAAAGAGGACTATCGAAATCAATGACGATGCAGGAGTGAGGATCAACAAGACTTTCCAATCTCTTGTTAAAGATGCAGGAGGGCATGAAAATATACCATTTTGTGAAAGAGATGTGAGGAATTATGTTAACAAGGAACGATGTGCAATTGGAAAACAAGGTGATGGTAAGGCTTTGCTAAGTTACTTCTGTAAAATGAGGGAACAAAACTCAAATTTCTTCTATGACATAGATTTGGATGACGATTTTCATGTAAGGAACGTGTTTTGGGCTGATGCAAGAAGTAGAGCTGCTTATGAGTATTTTGGAGATGTTGTAACTTTTGACACAACATATTTGACCAATAAATATGACATGCCTTTTGTCGCGTTTGTTGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGCTGGTTTCTGGAGAAGACACAGAATCATTTGTATGGCTATTCAAATCATGGCTTCGTTGTATGCTAGGAAAGGCCCCTATGGGTATTGTGACTGACCAATGTAAGGCTATGCAAAATGCTATTAAGTTAGTCTTCCCTACAACACGCCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTGCCGAAAAGCTCAGCAGTTACAGGGAATATAATAAGATGAAGTCTGCAATGAAAGAAGCAGTTTATGATACATACACAGAAACTGATTTTGAAGAGAAATGGTGTTCCTTCATCGACAAATTTGAGCTTCAAAATAATGAATGGTTGTGTGGGTTGTATAATGAACGTTATAGATGGGTGCCACCCTTGTTAAGGAAATATTTTTGGGCAGGTATGTCAACTACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGATATATCAATTCAACAACAACTCTAAATCAATTTACAAAGCAATATGACAATGCTCTTAGAAGTCGAGCTGAAAAGGAATTCGAATCAGATTTTAATTCAATGAATACTACAATTCCTTGTGGGTCAAGTTCATCCATTGAAAAGCAATTCCAAGGTGAGTACACCCATGCCAAATTCAAAGAAGTTCAAGTTGAATTCAGATCCAAAATGAATTGTGCTGCCTCGTTGAATGTTATGGAAGGTTTTTTGGCTACTTATCAAGTGTTGGAGGATGTTGTAATTGGAGTCTGGTCTAAAGAACGGGTATTAAAAGTTGTGTTTAATCGTGAGAACAATGATTTCAGTTGTGAATGCTCATTGTTTGAGTTTAGAGGCATCTTGTGTCGCCATGTGTTATCTGTGTGTGCTCTAGAAAGGATTAAAAATGTGCAAGAGAAGTATGTTTTAACAAGATGGAAGAAAAATATTAAAAGGAAGCATTCATATATTAAGAGCAGTTATGGCGTGACAGAATTGAAGCCAGAAATGGACATATTTGACAAATTATGCAAGCATTTCTATGAGATTGCTGAAGTAGCCGCAGGGGATGTAGATTCATCTAAGGCACTCCATGAAACATTAAATCAATTTAAGCCTAATTTGTGTGCTACAGATGGTAAAACCTGCAATGTCGAAGGAAGTTTCAATGATGAACTACAAAGTCCAAACAAAGATTCTGGAATTAAGAGTCCAAAGGGGGTCAAACGTAAAGGTCGTCCTCCATCTAAAAGGAAAATATCTGTAGCTGAAACAGTTGTTAAGAGGTCTAGAAAACGAACCAATCGAAGTGATGACAGAGAGAATACTACAGTATGTTTTTTTTTCCTTGAGAAATTTTTTATTTTGTATATAAATTTGTGTATTGAATCTTGTTTTTTTTTTTTGTCAAAATGTGTAGGAGTGCAATATTGA 2253 0.3622 MHSSNNTVDCVTIDDEVLEVDNFKYDSARWVPSTEMCFSSLDDVKCFYGEYALRKGFRWKIRTSRKGNDGEICYLMLACTREGSTVSKISCTLKTLPTQVKNCPTKICMKLEKDGLWYIKKFDPNHSHECSPTKSRLFKANKKMNMHVKRTIEINDDAGVRINKTFQSLVKDAGGHENIPFCERDVRNYVNKERCAIGKQGDGKALLSYFCKMREQNSNFFYDIDLDDDFHVRNVFWADARSRAAYEYFGDVVTFDTTYLTNKYDMPFVAFVGVNHHGQSTLLGCGLVSGEDTESFVWLFKSWLRCMLGKAPMGIVTDQCKAMQNAIKLVFPTTRHRWCLWHIMKKIAEKLSSYREYNKMKSAMKEAVYDTYTETDFEEKWCSFIDKFELQNNEWLCGLYNERYRWVPPLLRKYFWAGMSTTQRSESIHAFFDGYINSTTTLNQFTKQYDNALRSRAEKEFESDFNSMNTTIPCGSSSSIEKQFQGEYTHAKFKEVQVEFRSKMNCAASLNVMEGFLATYQVLEDVVIGVWSKERVLKVVFNRENNDFSCECSLFEFRGILCRHVLSVCALERIKNVQEKYVLTRWKKNIKRKHSYIKSSYGVTELKPEMDIFDKLCKHFYEIAEVAAGDVDSSKALHETLNQFKPNLCATDGKTCNVEGSFNDELQSPNKDSGIKSPKGVKRKGRPPSKRKISVAETVVKRSRKRTNRSDDRENTTVCFFFLEKFFILYINLCIESCFFFLSKCVGVQY* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3384 750 Pfam SWIM zinc finger 549 569 IPR007527 GO:0008270
Mal8g3384 750 Pfam MULE transposase domain 252 346 IPR018289 -
Mal8g3384 750 Pfam FAR1 DNA-binding domain 47 131 IPR004330 -
Mal8g3384 750 ProSiteProfiles Zinc finger SWIM-type profile. 537 573 IPR007527 GO:0008270
Mal8g3384 750 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 614 IPR031052 GO:0006355
Mal8g3384 750 MobiDBLite consensus disorder prediction 662 693 - -
Mal8g3384 750 PANTHER OS03G0843700 PROTEIN 26 614 - -
Mal8g3384 750 SMART 26again6 548 575 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3384 Mal-Chr8 94920109 94922361 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g3384 MULE 1.4e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3384 - - gmx:102667848 781.941