Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3378 ATGGATAGAAAACACAAAAATGATTCATCTTCTCAACTTGTACTTGATCTAAGTCTCTCTAGCAAGGATCCATGTGGTGATTCAAAGTCAGAACTCTTTCATGCAAATTTATCAGAAAGCTCCTCAGAATCTAGTGATGAGAATGAACTTGATCCAAGAGTATTCTCATGCAACTACTGCCAAAGAAAGTTTTATTGTTCTCAAGCACTTGGAGGACACCAAAATGCACACAAGCGCGAAAGAACTTTGGCGAGAAGAGGCTATACAACTAGCATGGCTTCTTCTCTACCTTCTTATGGTTTACAGAATTTTGAAACACAGCCAGCTATTGGAAAGCTTCCATTTGGAAATTTTCATGTGAGGAATGAAACAAAACCATCCTTTGGTGGTGGCATTTCAAGGGTAGCCATGTTTCCTAAAGGGATGATGAATGAAGGATTTGAAAGTTACTTATTGGATAACAACACTTCACATTTGAAGTCTAAAAGAGAGAAGTTGCAGAAGCTTGACTTGTCCCTTAAGCTCTAA 528 0.3826 MDRKHKNDSSSQLVLDLSLSSKDPCGDSKSELFHANLSESSSESSDENELDPRVFSCNYCQRKFYCSQALGGHQNAHKRERTLARRGYTTSMASSLPSYGLQNFETQPAIGKLPFGNFHVRNETKPSFGGGISRVAMFPKGMMNEGFESYLLDNNTSHLKSKREKLQKLDLSLKL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3378 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 103 - -
Mal8g3378 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Mal8g3378 175 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 103 IPR044246 GO:0009788
Mal8g3378 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 101 175 - -
Mal8g3378 175 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Mal8g3378 175 Gene3D Classic Zinc Finger 28 98 - -
Mal8g3378 175 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 101 175 IPR044246 GO:0009788
Mal8g3378 175 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3378 Mal-Chr8 94814329 94814962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3378 47 175 C2H2 Transcription Factor Family AT1G80730 41.420 1.30e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3378 - - mtr:MTR_4g006575 281.182