Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3374 ATGTCTCATACCGTGGACAACAACAACAACAACAACAATGGAGATCAGGTATTGAATTTTGGAGTTGGTTGCTCTGCCAAACGAATGAAGAGAAAGTATTTGATCGATTTAAATGAGTCTTATCCTTCTCCTGATTATTCTCAGGCTTTTGCTGATGGTTGCCACATGGCAACAGAAGGATATGCAAAACTCCAAGATGAAGTTCAACAACCAACATCAGATCTTCCATTGCTAACAACACCTGATCAACGACATGCTGCAGAAGAAGAAGAACAAGTCCATGTGCAAAATGTTGCAAACGAAATTTTGCTACACGCTGAAATTCTAAGGGCTAGGAAAGGAAAGATGCCAATGAATTATGCTGAAGGAGCGCCTCCCCAAGAACCTGTTGCAACTGATGAAGCAAAAATTGTATCATCTGATGAACAACAAGTTCCAATTACAACTGTTGGTGGTGAAGGAAGTTCCATTGGAGGAATGATATTGCTTCAACATGATGATACCGGTGCTAGTGGATCTTGTCCACAAAGGAAGAGGAAGAACGACTTCTCTGAATACAATAAAACCTCTTGCACCAGGATGGGCGATGCGCCAAAAGTAGTGGTCCGAGTTGAAAGCAATGTAGACATTGTGCATGATGGTTATCGCTGGCTAAAGTATGGATGCAAGGAGATCAAAGGAAATCATAATTACCCTAGGGGATACTATAGGTGCAAAACAAAAAGCTGTAACGTGAAAAAACAGGTGGAAAGGGATACAAAAAATCCAAAATATGTAATCGCTACATATGAAGGAAAACATAATCATGGATTGCCTATCATCACACAAAAAATCCCAACAAACTCAAGTATTACTACTACAACAGTAGTGCATGGGAATGCTAGCATGCCATCAACACCTTTTGCATTGCCTATAACTCACCCTCTCACACCTTCTCACCACTATGGAAGTTATGGATCTTATGGTATGAATTTCATTTGGCCTAATAATAATCCTTTCTTGAGCATGGTCAGCAATCACATGGTGATGCCTTATGGATTTATTAATGGGCAACATTTTCTAGATTGTTATGTTCCTCCTTCAGTTGCTACCTATCAAGTTGTTCCTGGTATTGGTGGATTTCCAATATCCCCATCACTACCACAATGTCATGACTTTAGTCCGCTTGGTGGGTACAATATTGATGCTACTCCGATCTTTCCTTTCAGCAGTACTACACCAATTGATCAGGTAGCCAACAACGTTCCTAATGATGAATGA 1260 0.4024 MSHTVDNNNNNNNGDQVLNFGVGCSAKRMKRKYLIDLNESYPSPDYSQAFADGCHMATEGYAKLQDEVQQPTSDLPLLTTPDQRHAAEEEEQVHVQNVANEILLHAEILRARKGKMPMNYAEGAPPQEPVATDEAKIVSSDEQQVPITTVGGEGSSIGGMILLQHDDTGASGSCPQRKRKNDFSEYNKTSCTRMGDAPKVVVRVESNVDIVHDGYRWLKYGCKEIKGNHNYPRGYYRCKTKSCNVKKQVERDTKNPKYVIATYEGKHNHGLPIITQKIPTNSSITTTTVVHGNASMPSTPFALPITHPLTPSHHYGSYGSYGMNFIWPNNNPFLSMVSNHMVMPYGFINGQHFLDCYVPPSVATYQVVPGIGGFPISPSLPQCHDFSPLGGYNIDATPIFPFSSTTPIDQVANNVPNDE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3374 419 Gene3D WRKY domain 195 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g3374 419 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 46 272 - -
Mal8g3374 419 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 272 IPR044810 GO:0003700
Mal8g3374 419 SUPERFAMILY WRKY DNA-binding domain 204 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g3374 419 SMART WRKY_cls 211 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g3374 419 ProSiteProfiles WRKY domain profile. 206 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g3374 419 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3374 Mal-Chr8 94704685 94707401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3374 130 272 WRKY Transcription Factor Family AT2G03340 40.690 4.87e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g3374 WRKY 1.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3374 K18835 - mtr:MTR_1g078260 417.542