Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3350 ATGACGGATCCATCTGAACTTGCTGCAAACCTTATTGACAATCACCACCATGGTGGATTGTTTAACAACTCAGTTGATTCAACTTTGGCTTCTGCTACCCTAGAAAATCAACATCGGGTATGTGCTAGGGAACATTTACATTCTCTGGTGTGTTGTCTTACACCAAACAATCAGACACCAAAGGTGACAGGAATGTTTCTAGAAATGGATCAATCAGAGGTTATCCATCTGATTGAGTCTCCAGAAGAATTGAAAATAAAGGTGTATGAGGCAATTTCATTGTTTCTGGAGCCTTATGCTTCTTTGAATTTATCAAGATCCCCCCACCCATCCCCTTCTACCAGGTTTTAA 351 0.4046 MTDPSELAANLIDNHHHGGLFNNSVDSTLASATLENQHRVCAREHLHSLVCCLTPNNQTPKVTGMFLEMDQSEVIHLIESPEELKIKVYEAISLFLEPYASLNLSRSPHPSPSTRF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3350 116 Pfam Poly-adenylate binding protein, unique domain 29 94 IPR002004 GO:0003723
Mal8g3350 116 Gene3D - 22 97 - -
Mal8g3350 116 PANTHER RNA BINDING PROTEIN 17 101 - -
Mal8g3350 116 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 21 100 IPR002004 GO:0003723
Mal8g3350 116 SMART poly_2 34 98 IPR002004 GO:0003723
Mal8g3350 116 SUPERFAMILY PABC (PABP) domain 27 98 IPR036053 GO:0003723
Mal8g3350 116 PANTHER POLYADENYLATE-BINDING PROTEIN 17 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3350 Mal-Chr8 94109035 94109644 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3350 24 105 Eukaryotic Initiation Factors Gene Family AT4G34110 46.667 1.22e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3350 K13126 - gmx:100798998 93.9745