Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3342 ATGGACTCCTCTGGATCCAAATATCCTGCTGGTGCTCCTCTGGTTCAGTCCAAACGCAAGATCGACGACACGGCGGTCATCGACCCGGACCTTCTCGACCTTTTTGTAGCATGTGAGAATCTCCCTTCCCTTGCTGTTGGGGGTTCTGATCAGAAGGATAAATCCCTTGCTGTTGTGGGTTCTGACTCCAAGGATAAATCCGATGAGAAGAGGAAAGCTCAGAATGGTGAGGCAGCAAAAAGATCCCGGTCGAAAAGGAAAGCCTATGTGACCAAACTAGAGGAAGAGCTTGAGCAAGCCCGGGGAAATGGGCAAATACAATTTAATGCAGAATATGATAGGTGGATGCAAGAGCAGAAGCAGAAAATTCAAGTGTTGGTAGCAGCTGCCAATGAGTTGATAGCAGCTGACAATGCAAGTGATATTGTTGTTTTTGAACAAAAACTTCGCAGTATTGTTAATCTTATTTTAAAACACTATGATAAGTATTTTCAGCTGAAACGCGAGGCAGCTAAGACGGACATTTTCCATCTCTTTTCTGGCATGTGGAAAACACCCGCTGAGAGTGTCATTTATGGCTTGGTGGCTTTAAAATATCTGATATTCTCGAACTTCTCGTAA 621 0.4428 MDSSGSKYPAGAPLVQSKRKIDDTAVIDPDLLDLFVACENLPSLAVGGSDQKDKSLAVVGSDSKDKSDEKRKAQNGEAAKRSRSKRKAYVTKLEEELEQARGNGQIQFNAEYDRWMQEQKQKIQVLVAAANELIAADNASDIVVFEQKLRSIVNLILKHYDKYFQLKREAAKTDIFHLFSGMWKTPAESVIYGLVALKYLIFSNFS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3342 206 ProSiteProfiles DOG1 domain profile. 105 206 IPR025422 GO:0006351|GO:0043565
Mal8g3342 206 MobiDBLite consensus disorder prediction 1 20 - -
Mal8g3342 206 Coils Coil 116 136 - -
Mal8g3342 206 Gene3D - 68 135 - -
Mal8g3342 206 PANTHER TRANSCRIPTION FACTOR TGA9 54 189 - -
Mal8g3342 206 Pfam Basic region leucine zipper 64 99 IPR004827 GO:0003700|GO:0006355
Mal8g3342 206 SUPERFAMILY Leucine zipper domain 67 101 IPR046347 GO:0003700|GO:0006355
Mal8g3342 206 Pfam Seed dormancy control 132 190 IPR025422 GO:0006351|GO:0043565
Mal8g3342 206 MobiDBLite consensus disorder prediction 44 85 - -
Mal8g3342 206 MobiDBLite consensus disorder prediction 57 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3342 Mal-Chr8 93984948 93985568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3342 48 198 bZIP Transcription Factor Family AT3G12250 38.798 4.32e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal8g3342 DOG1 5.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3342 K14431 - gmx:778190 117.087