Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3337 ATGGACGCCTCTGGATCCAAATATCCTGCTCGTGCTCCTCTAGTTCAGTCCAAACGCAAGATCGACGACACGGCGGTCATCGACCCGGACCTTCCTGACCTTTTTGTAGGATGTGAGAATCTCCCTTCCCTTGTTGTTGGGGGTTCTGATCAGAAGGATAAATCCCTTGCTGTTGTGGGTTCTGACTCCAAGGATGAGAAGAGGAAAGCTCAGAATCGTGAGGCAGCAAAAAGATTCCGGTCGAAAAGGAAAGCCTATGTGACCAAACTAGAGGAAGAGCTTGAGCAAGCCCGGGGAGATGGGCAAATAAAATTTAATGCAGAATATGATAGGTGGATGCAAGAGCAGAAGCAGAAAATTCAAGTGTTGGTAGCAGCTGCCAATGAGTTGATAGCAGCTGACAATGCAAGTGATATTGTTGTTTTTGAACAAAAACTTCGCAGTATTGTTAATCTTATTTTAAAACACTATGATAAGTATTTTCAGCTGAAACGCGAGGCAGCTAAGACGGACGTTTTCCATCTCTTTTCTGGCATGTGGAAAACACCCGCTGAGAGGTGTCATTTATGGCTTGGTGGCTTTAAAATATCTGATATTCTCGAACTTCTCGTAAATCAAGTGGGACCTCTCACAGATCAGCAGGAGATGTTCATCAATAACTTGCGACAATCCTCCCTAGAAGAAGAACATTTATTGTCTTGCAATTTGAAAATATTCCAATCGTCCATGTGGTCCATTGGTGCACCTTCCCCAACTATGGCCAAGGATAAACTTAGGACCCTCGAGGACTACATTCTACGGGCTGAAGATCTGCGCCACAAGAAACTAAAACAAATGCACAGTGAATTGACCACACGTCAATCGACTCTTGCAATCGTTGCCCTGCATGAATATTTTCTTCATCTGCACGGTCTCAGCTCTCACTGGCAGAACCTGAAAATTTGA 945 0.4434 MDASGSKYPARAPLVQSKRKIDDTAVIDPDLPDLFVGCENLPSLVVGGSDQKDKSLAVVGSDSKDEKRKAQNREAAKRFRSKRKAYVTKLEEELEQARGDGQIKFNAEYDRWMQEQKQKIQVLVAAANELIAADNASDIVVFEQKLRSIVNLILKHYDKYFQLKREAAKTDVFHLFSGMWKTPAERCHLWLGGFKISDILELLVNQVGPLTDQQEMFINNLRQSSLEEEHLLSCNLKIFQSSMWSIGAPSPTMAKDKLRTLEDYILRAEDLRHKKLKQMHSELTTRQSTLAIVALHEYFLHLHGLSSHWQNLKI* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3337 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 62 96 IPR004827 GO:0003700|GO:0006355
Mal8g3337 314 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Mal8g3337 314 SUPERFAMILY Leucine zipper domain 64 98 IPR046347 GO:0003700|GO:0006355
Mal8g3337 314 PANTHER TRANSCRIPTION FACTOR TGA9 98 309 - -
Mal8g3337 314 PANTHER TRANSCRIPTION FACTOR TGA9 27 92 - -
Mal8g3337 314 Pfam bZIP transcription factor 63 96 IPR004827 GO:0003700|GO:0006355
Mal8g3337 314 ProSiteProfiles DOG1 domain profile. 102 312 IPR025422 GO:0006351|GO:0043565
Mal8g3337 314 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 98 309 - -
Mal8g3337 314 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 27 92 - -
Mal8g3337 314 SMART brlzneu 60 122 IPR004827 GO:0003700|GO:0006355
Mal8g3337 314 Coils Coil 113 133 - -
Mal8g3337 314 Gene3D - 63 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3337 Mal-Chr8 93792014 93792958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3337 32 309 bZIP Transcription Factor Family AT5G06950 40.683 1.40e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal8g3337 DOG1 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3337 K14431 - gmx:100101881 222.246