Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3332 ATGTTTAGGTCTAGACCGTCTGTGCCACCAAATGTTACACCGGATGTTAGGGTTTGTAATGATGCGGTCGAGGGCAGTGGGTGTTATGGGATGGTGCAGGAAGCGGTTGATGCTGCGCTGGATGATTTGGTGGTTGGAGAGAGATTTGTGATACATATAAAGGAAGGGGTTTATGAAGAGAGGGTTAGGGTTCCGTTAAGGATGAGGAATGTTGTGTTTTTGGGGGATGGCATTGGTAAGACTGTCATTACTGGCTCTGCTAGTGTTGGACTACAGAAAGGGATGACTACCTATATCTCTGCCACCGTCGGTACCGAGAAATATATGGAGTTGTTTAATGACAAGACTAAAGTACACAAGAACTATCTCGGAAGGCCATGGAAGGAGTATTCCAGAACTGTTTTTATTAATTCGTTCTTGGAAGCCATAATCACACCAAAGGGTTGGATGCCATGGAGTGGAGATCTTGGACTGAGAACACTCTACTATAGAGAACTTGGCAACTCTGGACCTGGTTCTAATTTAACTAAGAGAGTGTCCTGGAGTATCCAGGTTCCTTCTGAACATGTGTCCACATATTCAGTACAAGGTTTCATTCAAAAAGACGATTGGGTTCACTGTACCAGTTATTCGCTCACCAACGGATGGGACTAA 654 0.445 MFRSRPSVPPNVTPDVRVCNDAVEGSGCYGMVQEAVDAALDDLVVGERFVIHIKEGVYEERVRVPLRMRNVVFLGDGIGKTVITGSASVGLQKGMTTYISATVGTEKYMELFNDKTKVHKNYLGRPWKEYSRTVFINSFLEAIITPKGWMPWSGDLGLRTLYYRELGNSGPGSNLTKRVSWSIQVPSEHVSTYSVQGFIQKDDWVHCTSYSLTNGWD* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3332 217 Gene3D - 109 216 IPR012334 -
Mal8g3332 217 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 2 105 - -
Mal8g3332 217 Gene3D - 10 108 IPR012334 -
Mal8g3332 217 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 104 208 - -
Mal8g3332 217 PANTHER PECTINESTERASE 104 208 - -
Mal8g3332 217 Pfam Pectinesterase 114 201 IPR000070 GO:0030599|GO:0042545
Mal8g3332 217 Pfam Pectinesterase 22 106 IPR000070 GO:0030599|GO:0042545
Mal8g3332 217 SUPERFAMILY Pectin lyase-like 17 211 IPR011050 -
Mal8g3332 217 PANTHER PECTINESTERASE 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3332 Mal-Chr8 93156447 93157735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3332 104 205 Carbohydrate Esterase AT5G09760 65.686 1.42e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3332 - - gmx:100802102 173.326