Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3325 ATGGAAGAGATTGACTTTAACTTGAAGGTTCGAGTGATTAATCTGTGGACGATACCAGACCGTACGAGTCCGTCTGAGATTGGAAGTATGAATATGATATTGCTTGATGAAAAGTGTGGTCAAATTCATGCGACTATAAGGAAGCATCTACTACCAGGTTTTAAGGATGAACTTGAAGAGGGCTCCACATACGTTATTGAAAAGTTCATGGTCGCACAAAATAATCCTACATTCAAGACGACAAACCATAAGTACAAATTGAACTTTATGGGAGGAAAGAATGTTTTTAAGGTGAACGCTACTGAAATCCCTCTTAGGTCCTTCAACTTCGTGACTTTCCTGGAGATATTGGCTAGCCACAAGGAAGACCGTTTACTTGATGTTATTGGTCATGTTGTTGAAAAGGACATTATCAAAGAAAATGAGAAGAATGGCAAAAGTCACAAGGTTTTGGATGCGACTTTGGAGGATTTGCAGGGAAATAGAATACACTGCACCCTATGGGATGATTATGCTGTTAGGATGCAAGAATGCTTGGATGCTCATGATTCCTCACTTCCTGTTGTGGTGATCTTTCAGCTGTGCAAACTTAAGAAGTATTTTGGTAATTCTATATTCATTGTCACAAGCCTATTGAATTATGATTGTTTTTTGAAGTTATCTATTGCATAA 672 0.381 MEEIDFNLKVRVINLWTIPDRTSPSEIGSMNMILLDEKCGQIHATIRKHLLPGFKDELEEGSTYVIEKFMVAQNNPTFKTTNHKYKLNFMGGKNVFKVNATEIPLRSFNFVTFLEILASHKEDRLLDVIGHVVEKDIIKENEKNGKSHKVLDATLEDLQGNRIHCTLWDDYAVRMQECLDAHDSSLPVVVIFQLCKLKKYFGNSIFIVTSLLNYDCFLKLSIA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3325 223 Pfam Domain of unknown function DUF223 32 118 IPR003871 -
Mal8g3325 223 PANTHER REPLICATION FACTOR A 1, RFA1 4 202 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal8g3325 223 SUPERFAMILY Nucleic acid-binding proteins 6 97 IPR012340 -
Mal8g3325 223 CDD RPA1_DBD_B_like 127 202 - -
Mal8g3325 223 Gene3D - 2 96 IPR012340 -
Mal8g3325 223 Gene3D - 101 215 IPR012340 -
Mal8g3325 223 SUPERFAMILY Nucleic acid-binding proteins 108 202 IPR012340 -
Mal8g3325 223 CDD RPA1_DBD_A_like 8 95 - -
Mal8g3325 223 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 4 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3325 Mal-Chr8 92865604 92868532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3325 6 209 Core DNA Replication Machinery Family AT5G08020 29.245 3.50e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3325 - - mtr:MTR_1g052715 248.44