Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3305 ATGGAAACCTCTGGATCCAAATATCCTGCCCGTGCTCCTCTGGTTCAGTCCAAACGCAAGATCGACGACACGGCGGTCTTCGACCCGGACCTTCCTAACCTTTTTGTAGGATGTGAGAATCTCCCTTCCCTTGTTGTCGGGGGTTCTGATCAGAAGGATAAATCCCTTGCTGTTGTGGGTTCTGACTCCAAGGATGAGAAGAGGAAAGCTCAGAATCGTGAGGCAGCAAAAAGATTTCGGTCGAAAAGGAAAGCCTATGTGACCAAACTAGAGGAAGAGCTTGAGCAAGCCCGGGGAGATGGGCAAATAAAATTTAATGCAGAATATGATAGGTGGATGCAAGAGCAGAAGCAGAAAATTCAAGTGTTGGTAGCTGCTGCCAATGAGTTGATAGCAGCTGACAATGCAAGTGATATTGTTGTTTTTGAACAAAAACTTCGCAGTATTGTTAATCTTATTTTAAAACACTATGATAAGTATTTTCAGCTGAAACGCGAGGCAGCTAAGGCGGACGTTTTCCATCTCTTTTCTGGCATGTGGAAAACAGCTGCTGAGAGGTGTCATTTATGGCTTGGTGGCTTTAAAATATCTGATATTCTTGAACTTCTCGTAAATCAAGTGGGACCTCTCACAGATCAGCAGAAGATGTTCATCAATAACTTGCGACAATCCTCCCTAGAAGAAGAACATTTATTGTCTTGCAATTTGAAAATATTCCAATCGTCCATGTGGTCCACTGGTGCAACTTCCCCAACTATGGCCAAGGATAAACTTAGGACCCTCGAGGACTACATTCTACGGGCTGAAGATCTGCGCCACAAGAAACTAACACAAATGCACAATGAATTGACCACACGTCAATCGACTCTTGCAATCGTTGCCCTGCATGAATATTTTCGTCATCTGCACGAACTCAGCTCTCACTGGCGGAACACGAACATTTGA 945 0.4423 METSGSKYPARAPLVQSKRKIDDTAVFDPDLPNLFVGCENLPSLVVGGSDQKDKSLAVVGSDSKDEKRKAQNREAAKRFRSKRKAYVTKLEEELEQARGDGQIKFNAEYDRWMQEQKQKIQVLVAAANELIAADNASDIVVFEQKLRSIVNLILKHYDKYFQLKREAAKADVFHLFSGMWKTAAERCHLWLGGFKISDILELLVNQVGPLTDQQKMFINNLRQSSLEEEHLLSCNLKIFQSSMWSTGATSPTMAKDKLRTLEDYILRAEDLRHKKLTQMHNELTTRQSTLAIVALHEYFRHLHELSSHWRNTNI* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3305 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 62 96 IPR004827 GO:0003700|GO:0006355
Mal8g3305 314 SUPERFAMILY Leucine zipper domain 64 98 IPR046347 GO:0003700|GO:0006355
Mal8g3305 314 PANTHER TRANSCRIPTION FACTOR TGA9 59 310 - -
Mal8g3305 314 Pfam bZIP transcription factor 63 96 IPR004827 GO:0003700|GO:0006355
Mal8g3305 314 ProSiteProfiles DOG1 domain profile. 102 312 IPR025422 GO:0006351|GO:0043565
Mal8g3305 314 SMART brlzneu 60 122 IPR004827 GO:0003700|GO:0006355
Mal8g3305 314 Coils Coil 113 133 - -
Mal8g3305 314 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Mal8g3305 314 Gene3D - 63 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3305 Mal-Chr8 92047447 92048391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3305 29 309 bZIP Transcription Factor Family AT5G06950 40.000 1.77e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal8g3305 DOG1 5.4e-23 No_clan