Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3277 ATGCCAAACCTCCCTCCTCTCCTATTCCCACACCCTCCCAACAAACCCCACCACCTCTACATCATCCACTCCGCCATCTCACTCTCCTCTCAAAACCTCAACACCGCCCAATCATTAATCAACTCCATCCTCCATGCTAACAACCACAACAACTCAACCATCGCTAAAAATTGTCTTCAGGTTTTTCAATACTCCCACGACCGCATCTCCCTCGCTGAAGAAGCTCTCTCACGTGGCAGAACAAACGACGCACGTGCTTTCATGAGCGCTGCTTTAGCATATCAGTATAACTGCTGGTATGGTCTCAAATACGCTAACTATACCGAAATAGTCTTCAAAATGATGACGTTTCTTGAATCTCTCACCAATCTCTCTAGTAACGCTCTTAGCATAATTCTCTCTTATGATCTCTTTGGTAATGATATTGATTCTTGGCGGCCACTGAGAACGGAGCGGGATGGTTTTTGGGAGGATTCTGGGTCTGGTGTGTTTAGGTCTGGACCGTCTATGCCGCCAAATCTTACGCCGGATGTTAGGGTTTGTAACGATGCGGTCGAGGGCAGTGGGTGTTATGGGATGGTGCAGGAAGCGGTTGATGTTGCGCCTGATGATTTGGTGGTTGGAGAGAGATTTGTGATTCATATAAAGGAAGGGGTTTATGAAGAGAGGGTTAGGGTTCCGATAAGGATGAGGAATTTTGTGTTTTTGGGTGATGGCATTGGTAAGACTGTCATTACTGGCTCTGCTAGTGTTGGACTACGGAAAGGGATGACTACCTATATCTCTGCCACCGTCGAGGTTGTTGGGGATGGATTCATGGCAAAAGATCTTACTATTGAAAACACAACAGGTGCTAATGCTCACCAAGCAATAGCATTCAGATCAGACAGCAATCAAGATACTCTATATGCTCATTCCCTGCGTCAGTTTTATAAGTCTTGTCGTATTATAGGCAACGTGGACTTCATTTTTAGAAACTCGGCTTCATTCTTCCAAGATTACGAAATACTAGTCCAGCCGAGGCAAGCAAGACCAAGGAAAGGGGAGAACAATGCCATTACTGCACATGGCAGAACAGATCCTGCTCAGTCGACAGGTTTCGTTTTCCACAACTGCTTTGTTAAAGGTACCCAGAAATATATGGAGTTGTTTAACGACAAGACTAAAGTACACAAGAACTATCTCAGAAGGCCATGGAAGGAGTATTCCAGAACAATGCCATGGATTGGAGATCTTGGACTGAGAACACTCTACTATAGAGAACTTGGCAACTCTGGACCTGGTTCTAATTTAACTAAGAGAGTGTCCTGGAGTAGCCAGGTTCCTTCTGAACATGTGTCCACATATTCAGTACAAGGTTTCATTCAAGAAGATGATTGGGTTCACCGTACCAATTATTCGCTCACCAACGGATGGGACTAA 1422 0.4501 MPNLPPLLFPHPPNKPHHLYIIHSAISLSSQNLNTAQSLINSILHANNHNNSTIAKNCLQVFQYSHDRISLAEEALSRGRTNDARAFMSAALAYQYNCWYGLKYANYTEIVFKMMTFLESLTNLSSNALSIILSYDLFGNDIDSWRPLRTERDGFWEDSGSGVFRSGPSMPPNLTPDVRVCNDAVEGSGCYGMVQEAVDVAPDDLVVGERFVIHIKEGVYEERVRVPIRMRNFVFLGDGIGKTVITGSASVGLRKGMTTYISATVEVVGDGFMAKDLTIENTTGANAHQAIAFRSDSNQDTLYAHSLRQFYKSCRIIGNVDFIFRNSASFFQDYEILVQPRQARPRKGENNAITAHGRTDPAQSTGFVFHNCFVKGTQKYMELFNDKTKVHKNYLRRPWKEYSRTMPWIGDLGLRTLYYRELGNSGPGSNLTKRVSWSSQVPSEHVSTYSVQGFIQEDDWVHRTNYSLTNGWD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3277 473 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 464 - -
Mal8g3277 473 SUPERFAMILY Pectin lyase-like 182 468 IPR011050 -
Mal8g3277 473 PANTHER PECTINESTERASE 14 464 - -
Mal8g3277 473 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 132 IPR035513 -
Mal8g3277 473 Pfam Plant invertase/pectin methylesterase inhibitor 16 131 IPR006501 GO:0004857
Mal8g3277 473 Gene3D - 173 472 IPR012334 -
Mal8g3277 473 SMART PMEI_2 5 131 IPR006501 GO:0004857
Mal8g3277 473 Pfam Pectinesterase 184 457 IPR000070 GO:0030599|GO:0042545
Mal8g3277 473 Gene3D Invertase/pectin methylesterase inhibitor family protein 10 134 IPR035513 -
Mal8g3277 473 CDD PMEI-like_3 21 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3277 Mal-Chr8 91051401 91053175 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3277 13 461 Carbohydrate Esterase AT5G09760 54.845 4.53e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3277 - - gmx:100802102 591.267