Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3274 ATGAGCGCTGCGTTGGCGTATCAGTATAACTGCTGGTCTGGTCTCATAAACGCTAACGATAACGAATTAGTCTTCAAAATGATGACGTTTCTTGAATCTCTCACCAATATATCTAGTAACGCTCTTAGCATGATTCTCTCTTATGATCTCTTTGGTAATGATACTGATTCGTGGCGGCCACCGCGAATGGAGCGGGATGGTTTTTGGGAGGATTCTAGGTCTGGTGTGTTTAGGTCTGGACCTTCTGTGCCGCCAAATCTTATGCCGGGTGTTAGGGTTTTTAAGGATGCGGTCGAGGGCAGTGGGTGTTATCAGACGGTGCAGGAAGCGGTTGATGTTGCGCTAGATGATTTGGTGGTTGGAGAGAGATTTATGATACATATAAAGGAAGGGGTTTATGAAGAGAGGGTTAGGGTATCGTTAAGGAAGAGGAATGTTGTGTTTTTGGGGGATGGCATTGTAAGACTTTCATTACTGGCTCTGCTAGTGTTGGACTACAGAAAGGGATGA 510 0.4529 MSAALAYQYNCWSGLINANDNELVFKMMTFLESLTNISSNALSMILSYDLFGNDTDSWRPPRMERDGFWEDSRSGVFRSGPSVPPNLMPGVRVFKDAVEGSGCYQTVQEAVDVALDDLVVGERFMIHIKEGVYEERVRVSLRKRNVVFLGDGIVRLSLLALLVLDYRKG* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3274 169 SUPERFAMILY Pectin lyase-like 99 153 IPR011050 -
Mal8g3274 169 Pfam Pectinesterase 97 153 IPR000070 GO:0030599|GO:0042545
Mal8g3274 169 PANTHER PECTINESTERASE 1 154 - -
Mal8g3274 169 Gene3D - 75 158 IPR012334 -
Mal8g3274 169 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3274 Mal-Chr8 90889186 90889695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3274 1 153 Carbohydrate Esterase AT5G64640 49.701 6.32e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3274 - - gmx:100802102 165.236