Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3273 ATGTTACTATTGAAAACACATCAGTTTTATAAGTCTTGCCGGATTATAGGAAACGTGGACTTCATTTTTGGAAACTCAGCTTCATTCTTCCAAGACTGCGAAATACTAGTACAGTCGAGGCAAGCAAGACCAAGGAAAGGGGAGAACAATGCCATTACTGCACATCGCAGAACAGATCCTGCTCAATCGACATGTTTCGTTTTCCACAACTGCTTAGTTAATGGTACCGAGAAATATATGGATTTGTTTAATGACAAGCCTAAAGTACACAAGAACTATCTCGGAAGGCCATGGAAGGAGTATTCCAGAACAATTTTTATTAATTCGTTCTTGGAAGCCATAATCACACCGAAGGGTTGGATGCCATGGAGTGAAGATATTGGACTGAGAACACTCTAG 399 0.4035 MLLLKTHQFYKSCRIIGNVDFIFGNSASFFQDCEILVQSRQARPRKGENNAITAHRRTDPAQSTCFVFHNCLVNGTEKYMDLFNDKPKVHKNYLGRPWKEYSRTIFINSFLEAIITPKGWMPWSEDIGLRTL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3273 132 SUPERFAMILY Pectin lyase-like 7 131 IPR011050 -
Mal8g3273 132 Pfam Pectinesterase 6 132 IPR000070 GO:0030599|GO:0042545
Mal8g3273 132 PANTHER PECTINESTERASE 7 132 - -
Mal8g3273 132 Gene3D - 1 132 IPR012334 -
Mal8g3273 132 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3273 Mal-Chr8 90874654 90875165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3273 8 132 Carbohydrate Esterase AT5G09760 70.400 2.25e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3273 - - gmx:100802102 221.861