Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3239 ATGTTTCGTTTGTTCTTATTTGCTTTTATCTTTCTGTTTGTGGGGTTGAAACTAGATGAAGCTAATGCTCAATATTACAAAAAACTGGGAAAAAAGCTCTTACCATACTCAACAATCATTGTAGATCCATTGGGAAATGGTAACTTCTCAACTATTCAATCTGCCATTGATTATATTCCTTTGAACAATAAGCATTGGGTTTCCATTAGGGTGAAGGCAGGTACTTACAGAGAAAAGTTGGAGATTCCATATGATAAGCCTTACATCATACTAAAAGGAGCAGGAAAGAGGAAAACCGTTGTTGAATGGGATGACCATGAACCAATCTCACAAAGTGCCACATTCTCTTCAATGGCTGATAATATTGTTGTCAAATCCATCAGTTTCAGGAATACATACAATAATCCGATAAACAACAATCCCCGCATAGCTGCCGTAGCTGCAACGATAAGCGGAGATAAGACATATTTTTTTAGGGTTGGTTTCTTTGGTTATCAAGACACTTTATGGGACAACAATGGAAGACACTACTACAAGCTTTGTACCATACAAGGTGCTGTAGATTTTATCTTTGGTGCAGGCCAGTCTTTGTTCGAGAGGTGTTCCATATCTGTTATTGGTGATGGTTATATAACAGCACAAGGTAGAATGAATGCAAACGATGCAAGTGGGTTTGTTTTCAAAGATTGTCATGTCTTTGGAAATGCAAAGACTTATTTGGGAAGGCCTTGGCGACGCTATGCCAAAGTCTTATTTTACAAAACCAATATGACCAACATTGTAGAACCTAGTGGTTGGAATCCATGGAATTTTGATGGTGAAGAGGATCAAATAACTTTCACAGAGTATGGCAATTTTGGACCAGGTGCTGATACATCAAAGAGAGTGAGTTGGGTTAAGAAATTGGATCTAGCAACTATTGAAAATATGACAAGTGTGAACTTCATCAACACACCAGAAGAATGGATTAATTATCAACCGTTCTAA 987 0.3759 MFRLFLFAFIFLFVGLKLDEANAQYYKKLGKKLLPYSTIIVDPLGNGNFSTIQSAIDYIPLNNKHWVSIRVKAGTYREKLEIPYDKPYIILKGAGKRKTVVEWDDHEPISQSATFSSMADNIVVKSISFRNTYNNPINNNPRIAAVAATISGDKTYFFRVGFFGYQDTLWDNNGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGDGYITAQGRMNANDASGFVFKDCHVFGNAKTYLGRPWRRYAKVLFYKTNMTNIVEPSGWNPWNFDGEEDQITFTEYGNFGPGADTSKRVSWVKKLDLATIENMTSVNFINTPEEWINYQPF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3239 328 Gene3D - 36 327 IPR012334 -
Mal8g3239 328 PANTHER PECTINESTERASE 10-RELATED 5 327 - -
Mal8g3239 328 ProSitePatterns Pectinesterase signature 1. 63 82 IPR018040 -
Mal8g3239 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 327 - -
Mal8g3239 328 SUPERFAMILY Pectin lyase-like 36 325 IPR011050 -
Mal8g3239 328 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
Mal8g3239 328 Pfam Pectinesterase 39 317 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3239 Mal-Chr8 89189741 89197645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3239 2 275 Carbohydrate Esterase AT2G19150 41.489 1.35e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3239 - - gmx:100819252 459.144