Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3238 ATGATGTTTCGTTTGTGCTTGCTTCCATTTATCTTTCTCTTGGTTGGGTTGGGAGTACAAGATGCCAATGGTCAATACTACCGGAAAGTCGGAAATAAAATATTTCCTTTCTCCACGATAGTGGTCGATCAATCGGGAAATGGACACTTTACTTCGATTCAATCTGCGATTGATTCAATCCCTTTTTACAATAGGCATTGGGTCGCAATCAGGGTGATGGCTGGTATCTATAGAGAAAAAGTTGTGATTCCGCAGAATAAATCTTACATCATATTGAAGGGAGCTGGTAAGAGAAAAACTGTTGTTGAGTGGTATGATCACAATGGACCTGAAAAAAACCCTACCTTCGCAATATTGGCCGATAACATTGTTGTCAGATGTATGAGTTTTCGGAACTCATACAACAATCCCATAAATGGGCATAGAAAGGCACGTGCAGTAGCTGCAACGGTAATTGGTGACAAAGTCCATTTTTTTAGAGTTGCTTTTTATGGCTACCAAGACACATTGTATGACGCCAATGGAAGACATTACTACAAACTTTGTACCATACAAGGTGCTGTAGATTTTATCTTTGGTGCAGGGCAATCATTGTTTGAGAGGTGTTCCATATCAGTTATTGGAGGTGGTTTTATAACAGCACAAGGTAGAATGAGCCCAAATGATACAAATGGATTTGTATTTAAAGATTGTCATATCTTTGGAAATGCAAAAACTTACTTGGGGAGGCCATGGAGACCTTATGCAAGAGTGCTATTTTACAAGACCAACATGACCAAAATTGTAGAACCCAAGGGTTGGAATGAATGGAGTCTTGATGGTCGTGAGGATCTAACAACATATGCTGAGTATGGAAATTTTGGACCAGGTGCTGATACATCAAAGAGAGTGAGTTGGGTTAAGAAATTGGATTTAGCAACAATTGAAAATATGGCAAGTGTGAACTTCATCAACACACCAGAAGAATGGATTAATTATCAACCATTCTAA 990 0.3889 MMFRLCLLPFIFLLVGLGVQDANGQYYRKVGNKIFPFSTIVVDQSGNGHFTSIQSAIDSIPFYNRHWVAIRVMAGIYREKVVIPQNKSYIILKGAGKRKTVVEWYDHNGPEKNPTFAILADNIVVRCMSFRNSYNNPINGHRKARAVAATVIGDKVHFFRVAFYGYQDTLYDANGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGGFITAQGRMSPNDTNGFVFKDCHIFGNAKTYLGRPWRPYARVLFYKTNMTKIVEPKGWNEWSLDGREDLTTYAEYGNFGPGADTSKRVSWVKKLDLATIENMASVNFINTPEEWINYQPF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3238 329 Pfam Pectinesterase 40 317 IPR000070 GO:0030599|GO:0042545
Mal8g3238 329 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Mal8g3238 329 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 328 - -
Mal8g3238 329 SUPERFAMILY Pectin lyase-like 38 326 IPR011050 -
Mal8g3238 329 PANTHER PECTINESTERASE 10-RELATED 11 328 - -
Mal8g3238 329 Gene3D - 37 328 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3238 Mal-Chr8 89169590 89173804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3238 3 276 Carbohydrate Esterase AT2G19150 41.489 6.00e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3238 - - gmx:100819252 446.817