Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3227 ATGGAACAGCAAAACTTGAACCTGCCGGAGTCACAGATGACAATGACAGAGCCGGCGGCGAAGAAACCATCGAAAGGCTCTCACACGAAGGTGGAGGGACGTGGCCGGAGGATTCGACTGCCGGTAGCATGCGCAGCCAGGGTGTTTCAATTGACGCGGGAGCTTGGTCACAAGACTGAGGGAGAAACTATCCAATGGTTGCTGGAAAAAGCTGAACCTAAGATCATTGAAGCCACCGGCACAGGAACGGTTCCGGCCATAGCCGTGTCAGTGAGTGGAACGTTAAAGATTCCAACAACATCAGCAGCAAGACCAGACGGTGAAGACGCCCCGAAGAAGCGAAAGAAGATATCATCAAACAGTGAATTTGTTGATTTGAATGAACAAGCTTCAATGTTTTCAGGGCTTGCACCAGTGGCACCAACTGCATACGGTGGCGAAGGCGGAGGCAGCGGCGGACTATTCTCGTTATTGGATATGAATCAGCCTCAGTTTTGGGCTATAGGAATGCAGCATCAACCTTCAACTGTTTCTTCAACTTTGGCTCCAAGTTCTTCCGCTGCAACCAATCAAATGTAA 579 0.5009 MEQQNLNLPESQMTMTEPAAKKPSKGSHTKVEGRGRRIRLPVACAARVFQLTRELGHKTEGETIQWLLEKAEPKIIEATGTGTVPAIAVSVSGTLKIPTTSAARPDGEDAPKKRKKISSNSEFVDLNEQASMFSGLAPVAPTAYGGEGGGSGGLFSLLDMNQPQFWAIGMQHQPSTVSSTLAPSSSAATNQM* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3227 192 MobiDBLite consensus disorder prediction 106 121 - -
Mal8g3227 192 MobiDBLite consensus disorder prediction 1 32 - -
Mal8g3227 192 Pfam TCP family transcription factor 25 109 IPR017887 -
Mal8g3227 192 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 169 IPR005333 GO:0003700
Mal8g3227 192 MobiDBLite consensus disorder prediction 99 121 - -
Mal8g3227 192 ProSiteProfiles TCP domain profile. 24 78 IPR017887 -
Mal8g3227 192 MobiDBLite consensus disorder prediction 1 18 - -
Mal8g3227 192 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3227 Mal-Chr8 88886778 88887356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3227 1 170 TCP Transcription Factor Family AT5G51910 55.249 5.86e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal8g3227 TCP 3.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3227 - - cam:101514016 226.868