Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3224 ATGCTATATTTATTTTCAGTTGAAAAAATTGTGGAACCTGTAACAATAGATGACTGGGCTGTGGTGGACTTTTCTAATTACCGTGATGTGCGAGGAATTGTGAGGGATCTGATAAAATGTGGAAAATTGAAAGGAATTCATATCGAACAACCTTCTTTTGTATTTGATGAAAACCGCCAATTTAACCGCGCACCACCTGTGGTTAGAGTTCAGAAAATGTTTGAGAGCATGCAGTCTAAAATCAAAGATCCTCCTAAGTTTCTCCTTTGTTTGCTTCCTCAGAAGAACTCCGATCTTTATGGTCCGTGGAAGAAGAGGAATCTTGCGGAGGAAGGAATCATTACTCAGTGCATGGTGCCTACGAGGGTTAACGACCAGTATCTGACCAATATTTTGCTGAAGATCAATGCTAAGCTTGATGGGATGAATTCATTTTTAGGCGTTGAACACGCTCGTTCCATCCCTTTTGTGTCTAGAGATCCTACTCTCATTTTGGGCATGGATGTTTCTCACGGTTCACATGGGCATGACATTCCTTCAATTGATGCGGTAATAAAAGTTCTTATTCCACTGATATCTAAATATAGGGCAAGTGTGCGAACTCAGGGTTCGAAGATTGAGATGATTGATAATCTTTTCAAGCCAATGTCTGATAATAGAGATGGAGGAATTATAAGGGAACTTTTGGTTGATTTCTATAATAGTTCTGGGAACAGAAAACCAGCCAATATCATCATTTTCAGGGATGGTGTGAGTGAGTCTCAATTCAACCAAGTTTTAAACATTGAACTTGCCCAAATCATTGAGGCCTGTAGATTTCTTGATGAAAATTGGCACCCCAAGTTTTTGTTGATTGCCCAGAAGAGACATCACACAAAATTCTTCCAACCTGGAACTCCAAACAATGTGCCACCTGCTATCAGCGCAGCACTACTGCCACCTCTGTCGGTTCTAATTAGTAATAACTTTTACGCAGTTGCTCCAATATGCTACGCACACTTGGCTGCTACTCAAGTTGCACGATTCATCAAGTTTGAGGGTAGCATGTCTGAAACTGCTTCTAGCCACCGTGGTTCCAACTCATCGTCCATCCCACAGTTGCCGAAGTTTCATAAGAATGTTTGGAATTCCATGTTTTTTGTTTAA 1146 0.4066 MLYLFSVEKIVEPVTIDDWAVVDFSNYRDVRGIVRDLIKCGKLKGIHIEQPSFVFDENRQFNRAPPVVRVQKMFESMQSKIKDPPKFLLCLLPQKNSDLYGPWKKRNLAEEGIITQCMVPTRVNDQYLTNILLKINAKLDGMNSFLGVEHARSIPFVSRDPTLILGMDVSHGSHGHDIPSIDAVIKVLIPLISKYRASVRTQGSKIEMIDNLFKPMSDNRDGGIIRELLVDFYNSSGNRKPANIIIFRDGVSESQFNQVLNIELAQIIEACRFLDENWHPKFLLIAQKRHHTKFFQPGTPNNVPPAISAALLPPLSVLISNNFYAVAPICYAHLAATQVARFIKFEGSMSETASSHRGSNSSSIPQLPKFHKNVWNSMFFV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3224 381 ProSiteProfiles Piwi domain profile. 87 295 IPR003165 GO:0003676
Mal8g3224 381 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 325 380 - -
Mal8g3224 381 Gene3D - 151 381 IPR036397 GO:0003676
Mal8g3224 381 SMART Piwi_a_2 87 344 IPR003165 GO:0003676
Mal8g3224 381 Pfam Piwi domain 88 305 IPR003165 GO:0003676
Mal8g3224 381 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 5 306 - -
Mal8g3224 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 306 - -
Mal8g3224 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 325 380 - -
Mal8g3224 381 Gene3D - 8 150 - -
Mal8g3224 381 SUPERFAMILY Ribonuclease H-like 71 330 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3224 Mal-Chr8 88771616 88775953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3224 8 295 Eukaryotic Initiation Factors Gene Family AT5G43810 35.410 3.99e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3224 K11593 - gmx:100792105 475.707