Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3210 ATGAGTTCTTCTTTTCAAGTGAGCAACCGTAGGGGAGATGTGGAAAGAGGATTTTCAGAAGATGTTCCTCAGAGAACCACCATGCTGATCTGGTTATTAGTGAATAACCTGTTGATGTTTATAATTCTGAGCATGTGTTCAGCTTTTCTTGAGCGACATTTTAATCAGATAGATAATGAGACTTTAAGAGTTCTTAACACGGATACTGCTGCTAATACTCTTTCAATGACTGAGGATGAAATAAATTCCTTGCCTATTCGCAAGTATAACGTTTCTGGTCCAACAAATGATGGATCATCCTCTTCTTCAGAAGCAGATGAGATTAACCAAGACTCTAATGAAGAAGAGGGAAGTGGCAATGGTCCAGAAGAAGAGCTAACATGTACTATATGCATGGACCAAGTTAAGAGGGAGGAATTTGTTCGAAGTTTGCCATGCTTTCATCAGACTTGCCTATGCTTCTAA 465 0.3914 MSSSFQVSNRRGDVERGFSEDVPQRTTMLIWLLVNNLLMFIILSMCSAFLERHFNQIDNETLRVLNTDTAANTLSMTEDEINSLPIRKYNVSGPTNDGSSSSSEADEINQDSNEEEGSGNGPEEELTCTICMDQVKREEFVRSLPCFHQTCLCF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3210 154 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 48 149 - -
Mal8g3210 154 SUPERFAMILY RING/U-box 123 152 - -
Mal8g3210 154 MobiDBLite consensus disorder prediction 85 124 - -
Mal8g3210 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 153 IPR013083 -
Mal8g3210 154 PANTHER TARGET OF ERK KINASE MPK-1 48 149 - -
Mal8g3210 154 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3210 Mal-Chr8 88449359 88451787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3210 48 149 C3H Transcription Factor Family AT3G55530 46.729 2.21e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3210 K16283 - gmx:100805406 118.627