Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3187 ATGATGGATGTTGTTATTGCTGGAAAATTCAAGCTTGGGAGGAAACTTGGGAGTGGAACATTTGGGGAGCTTTATTTGGGTGTTAATGTGAAAACTCAAGAGGAAGTGGCTCTGAAGCTGGAACATGTGAAGACAAAGCATCCTCAACTTCTGTACGAGTCCCAAATGTTTAGGATTCTTCAAGGAGGAACCGGCATACCTCATATAAAGTGGTATGGAGTCGAGGGTGACTACAATGTCATGGCTATTGACCTTCTTGGACCAAGTCTCGAAGACTTATTTAATTATTGTAGTAGAAAATTCTCCCTAAAAACAGTATTGATGCTTGCTGATCAACTAATAAACAGAGTAGCTTATATGCACTCTCGGGGATTAGTGCATCGTGATATAAAGCCTGACAACCTTCTAATGGGTTCTGGCAGCAAGGCAAATCAGGTTTACATTATTGACTATGGCCTTTCAAGAAAGTATTGTGAACTTAAAACACAAAGGCACATACGATACAGGGAAAACAAGGATTTCATTGGAACTGCTCAATATGCAAGTCTTTCAACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTCCTAATGTACTTTTTGAAAGGAAGTCTTCCATGGAACGGGCACGGCATGAAAGCTTTCACTAGACAGAAGAAATATGAATGGATAAGGGAAAAGAAGATGCTTACTCCAATAGAGGTCTTGTGCAAGTCTCATCCAATAGAATTCACGTCATATTTCCACTATTGCCGATCATTGCGATTTGAAGATAAACCCAATTATTCATATCTTAAGAAACTCTTTCAGGACCTCTTCACTAGAGAAGGTTATGAGTTTGACTTTGTATTTGATTGGACTACATTGAAGGATCCAGAAATTGGTTCCAGTTCTAGAACAAGTCCAAATGTGACACAAGTCTTAAACCCAGGACCATATGAAGATAGATTAGAACGACCTTCAGTCGGACAAGAGATTCGAGATAGATTATCAAGTGAGGTGGGGGTATTTTCAAGAAGGAATGGCTCCGGGGATGAACTGCAGCATAAGTCTTTAGATAATATGCCGTCTTCTAAAGATGTGGAACCTGATTCTGAAAGTGCCCGCAGTTCTACTAGTAAGAGCAGGTCTTCAAAAAGGCCTATCATATCAAGCAGCAGAACAAGCTCTTTTACGGAACCTAGTGAAAGCCGGTCTAGTCAATTGGTCTCGAGCTATAGCCGTACCGCAGGGACACGAGATGGTTGCGATGATACAGTCAGGAGCTTTGAGCTCCTCTCAATTGGTACACGTAAAAGGAAATGA 1326 0.4072 MMDVVIAGKFKLGRKLGSGTFGELYLGVNVKTQEEVALKLEHVKTKHPQLLYESQMFRILQGGTGIPHIKWYGVEGDYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVAYMHSRGLVHRDIKPDNLLMGSGSKANQVYIIDYGLSRKYCELKTQRHIRYRENKDFIGTAQYASLSTHLGIEQSRRDDLESLGYVLMYFLKGSLPWNGHGMKAFTRQKKYEWIREKKMLTPIEVLCKSHPIEFTSYFHYCRSLRFEDKPNYSYLKKLFQDLFTREGYEFDFVFDWTTLKDPEIGSSSRTSPNVTQVLNPGPYEDRLERPSVGQEIRDRLSSEVGVFSRRNGSGDELQHKSLDNMPSSKDVEPDSESARSSTSKSRSSKRPIISSSRTSSFTEPSESRSSQLVSSYSRTAGTRDGCDDTVRSFELLSIGTRKRK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3187 441 PANTHER CASEIN KINASE I-LIKE PROTEIN 2 420 - -
Mal8g3187 441 SMART serkin_6 10 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3187 441 MobiDBLite consensus disorder prediction 350 376 - -
Mal8g3187 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mal8g3187 441 MobiDBLite consensus disorder prediction 377 419 - -
Mal8g3187 441 SUPERFAMILY Protein kinase-like (PK-like) 5 293 IPR011009 -
Mal8g3187 441 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Mal8g3187 441 PANTHER CASEIN KINASE-RELATED 2 420 - -
Mal8g3187 441 Pfam Protein kinase domain 11 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3187 441 MobiDBLite consensus disorder prediction 302 425 - -
Mal8g3187 441 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mal8g3187 441 ProSiteProfiles Protein kinase domain profile. 10 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3187 Mal-Chr8 87654112 87658109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3187 5 225 CBL-interacting serine-threonine protein kinases AT4G18700 25.410 1.96e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal8g3187 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3187 K08960 - jre:108991207 602.438