Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3059 ATGGATGGATCAGCTGGCCCTGGTGGTGGAAATGTGAACGCGTTTCTACGGAATTATAAGATGGGAAAAACTCTTGGTATTGGGTCCTTTGGCAAAGTGAAAATTGCCGAGCACGTATTGACGGGTCATAAAGTTGCCATTAAGATTCTCAATCGCCGAAAAATAAAGAATATGGACATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCACCACATTATTCGCCTTTATGAGGTTGTAGAAACCCCAACCGACATATATGTGGTGATGGAGTATGTGAAATCTGGAGAGCTCTTTGATTACATAGTAGAAAAGGGTAGGCTTCAAGAAGATGAAGCCCGCAGTTTCTTCCAGCAGATTATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTAGTTCATAGAGACCTGAAACCCGAAAATTTACTTTTGGACTCAAAATGGAGTGTCAAGATTGCTGATTTTGGGCTGAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCTAACTATGCAGCTCCAGAGGTTATCTCTGGGAAATTATATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATACGCACTTCTGTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCCAACCTCTTCAAAAAAATAAAGGGGGGGATATATACTCTTCCTAGTCATCTATCTCCTGGTGCCAGAGATTTGATACCGAGGCTGCTTGTGGTGGATCCCATGAAAAGGATGACCATACCAGAGATACGCCAGCACCCATGGTTCCTACTTCATCTGCCTCGATATTTGGCGGTGCCACCACCAGATACAGTTCAACAGGCCAAAAAGATTGATGAGGAGATTCTTCAGGAGGTGGTTAATAGGGGATTTGCAAGGGAACCCTTGGTTGAGTCCCTTAAGAACAGGGTACAAAATGAGGGTACTGTAACTTACTATTTGTTATTGGACAATCGTTATCGTGTTTCCACTGGCTATCTTGGAGCTGAGTTTCAAGAGACAATGGATTCTGGTTTGAACCGTATCCACTCTGGTGAAGTTGCTCCTCCAGTCGTGGCACACCGCTTTCCAGGGTATATGGATTATCAAGGAGTAGGAATGCGGCAACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGACTTCAGTCTCGAGCCCAACCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAATTGAGCGTCTGTTGGAAAAAAATTGGACCCTATAACATGAAGTGCAGATGGGCTGTTGTCATCCCAGGTCATCATGTGGTCAACGATTCTGTGCATAGTAATAATTACCTTGGAAATGACAACATTATTGAGAATGAAGTTGTTCCTACGTCAACTGTAGTCAAGTTTGAACTGCAGCTGTACAAAACTCAAGAGAAATATCTGCTTGATCTTCAAAGGCTTGAGGGACCTCAGTTTCTTTTCTTGGATCTTTGTGCTGCCTTCCTTGCGCAGCTTCGCGTTCTATAG 1533 0.4331 MDGSAGPGGGNVNAFLRNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMDMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRLLVVDPMKRMTIPEIRQHPWFLLHLPRYLAVPPPDTVQQAKKIDEEILQEVVNRGFAREPLVESLKNRVQNEGTVTYYLLLDNRYRVSTGYLGAEFQETMDSGLNRIHSGEVAPPVVAHRFPGYMDYQGVGMRQQFPAERKWALGLQSRAQPREIMTEVLKALQELSVCWKKIGPYNMKCRWAVVIPGHHVVNDSVHSNNYLGNDNIIENEVVPTSTVVKFELQLYKTQEKYLLDLQRLEGPQFLFLDLCAAFLAQLRVL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3059 510 Gene3D Kinase associated domain 1, KA1 395 508 - -
Mal8g3059 510 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 509 - -
Mal8g3059 510 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 462 509 IPR001772 -
Mal8g3059 510 SUPERFAMILY Protein kinase-like (PK-like) 16 272 IPR011009 -
Mal8g3059 510 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3059 510 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mal8g3059 510 Gene3D Transferase(Phosphotransferase) domain 1 10 350 - -
Mal8g3059 510 SUPERFAMILY KA1-like 328 509 IPR028375 -
Mal8g3059 510 PANTHER SERINE/THREONINE KINASE 9 509 - -
Mal8g3059 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mal8g3059 510 CDD STKc_AMPK_alpha 16 271 - -
Mal8g3059 510 CDD UBA_SnRK1_plant 293 333 - -
Mal8g3059 510 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3059 510 CDD AMPKA_C 389 507 - -
Mal8g3059 510 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3059 510 Pfam Kinase associated domain 1 467 509 IPR001772 -
Mal8g3059 510 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3059 Mal-Chr8 83197750 83201918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3059 19 272 CBL-interacting serine-threonine protein kinases AT4G24400 51.765 2.19e-91 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mal8g3059 Pkinase 2.6e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3059 K07198 - gmx:547544 905.975