Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3048 ATGGCGGCAGGACTAACCGCCACTATAACCATTCAACCCTTAAACCGTCACTACAAACCTTTGTTACCTTATAATCTCATCAAACCTACACCAACACTTATCTTCTCCCCTTTAAGATGTTTCCATCAAAGAACAACCCCAAAAACACAAAGGTTCAAAAGCTTCACCCTTTGTGTTCTCATGGAAGATCCAAAACGTGATACTCAAATGGAAATTGAACAAGAAGAAAAACCACCTCTTTTAGAGAATAATAATTATATTATTCCTCAAGTTGTGTCACCAAAAATGGCAGAGAAATTGGCTAGGAAAAAATCAGAGAGATTTACGTATCTTGTTGCAGCTGTTATGTCTAGCCTTGGTATAACATCTATGGCTGTCTTGTCTGTTTATTTAAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCTTGGTCTGAAATGTTTGGTACATTTGCTCTATCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCTTTGTGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGACCTTTCGAGTTGAATGATGTTTTCGCAATAATCAATGCTGTCCCTGCAATCGCTCTCCTTAACTTTGGTTTCTTTCACAAAGGATTGGTCCCTGGCCTTTGCTTCGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTATATGTTTGTACACGACGGTTTGGTTCATAGGAGATTCTCAGTGGGACCCATTGCCAATGTGCCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCAGACAAATTCAATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAGGAGGTGGGAGGGCTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGGATGAAATCATACAATAGTAATAGTTCATGA 951 0.4238 MAAGLTATITIQPLNRHYKPLLPYNLIKPTPTLIFSPLRCFHQRTTPKTQRFKSFTLCVLMEDPKRDTQMEIEQEEKPPLLENNNYIIPQVVSPKMAEKLARKKSERFTYLVAAVMSSLGITSMAVLSVYLRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGPFELNDVFAIINAVPAIALLNFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFSVGPIANVPYFRRVAAAHKLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEISRRMKSYNSNSS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3048 316 PANTHER BETA-CAROTENE HYDROXYLASE 5 310 - -
Mal8g3048 316 Pfam Fatty acid hydroxylase 158 285 IPR006694 GO:0005506|GO:0008610|GO:0016491
Mal8g3048 316 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 5 310 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3048 Mal-Chr8 82901313 82905928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3048 1 228 Chloroplast and Mitochondria Gene Families AT4G25700 58.952 3.48e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3048 K15746 - gmx:100785541 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2095 1 27421231 27423589 Mal8g3048 8 82901313 82905928 ECH
Mal8g3048 8 82901313 82905928 Mal8g3048 8 82901313 82905928 ECH
Mal8g3048 8 82901313 82905928 Mal1g2095 1 27421231 27423589 PCT