Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3032 ATGGTATCAAAAAACCCGAACCCGCCCGAAGGTTTCTGCTTGGATCCGAATAGCATGGCTCTACCCGGTTTCGGCCCCTTCGCCGCCTCCGACGACGCGGCCAAGAAGATCCGGAAGCCGTATACTATAACCAAGTCTAGAGAGAATTGGACTGAACCTGAACATGACAAGTTTCTTGAAGCTCTTCAACTGTTTGACCGTGATTGGAAAAAAATTGAAGCATTTGTTGGATCAAAGACTGTTATACAGATACGTAGCCATGCACAAAAATACTTTCTAAAGGTTCAGAAGAGTGGAGCAAATGAACATCTTCCTCCGCCTAGACCTAAAAGAAAAGCTGCCCATCCATATCCTCAAAAAGCTTCCAAAAGTGCTCCTGTACTCGCACAATTACCAGGATCTTTTCAGTCTTCACCGGCTTTGCTTGAACCTGGATATATACTGAAGAATGATTCCATACCAAAGCTTGAAACTCCTATTATGAACACTGTGGTGTCTTCCTGGTCAAACCACACGTTGCAAAACACGAATTTATTACATGTGCCAAAGGTGAATAATTCTTGTAGTAGCACTGAAAGTACTCCTAAAGTGCGACCGGTTGGTGAATCTAATAGTCAACACTTTAATGACTTCTATTTTATTTCTAATGCAGTTCTTCCAGATTTTTCTCAAGTATACAACTTCATTGGCAGTGTATTTGACCCAGAAGCAACTGAACATTTACAGAAACTTAAACAGATGGACCGTATAGATGTTGAGACGGTGCTTCTGTTGATGAGAAACCTGTCTATCAATTTAACTAGCCCAGACTTTGAGGATCACAAAAAGCTGCTTTCATCCTATGAAGTTGATCTAGAGACAAATAACTATCTCAATCCAGATAGACCGATACACGACGAGCCGTTGAAGAGTGCTACTACTTAA 924 0.4156 MVSKNPNPPEGFCLDPNSMALPGFGPFAASDDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKSAPVLAQLPGSFQSSPALLEPGYILKNDSIPKLETPIMNTVVSSWSNHTLQNTNLLHVPKVNNSCSSTESTPKVRPVGESNSQHFNDFYFISNAVLPDFSQVYNFIGSVFDPEATEHLQKLKQMDRIDVETVLLLMRNLSINLTSPDFEDHKKLLSSYEVDLETNNYLNPDRPIHDEPLKSATT* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3032 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 96 IPR017930 -
Mal8g3032 307 CDD SANT 49 92 IPR001005 -
Mal8g3032 307 Gene3D - 49 97 - -
Mal8g3032 307 ProSiteProfiles Myb-like domain profile. 42 92 IPR001005 -
Mal8g3032 307 Pfam Myb-like DNA-binding domain 47 92 IPR001005 -
Mal8g3032 307 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Mal8g3032 307 SMART sant 46 94 IPR001005 -
Mal8g3032 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 94 IPR006447 GO:0003677
Mal8g3032 307 PANTHER PROTEIN REVEILLE 6 28 290 - -
Mal8g3032 307 MobiDBLite consensus disorder prediction 97 123 - -
Mal8g3032 307 ProSiteProfiles SANT domain profile. 45 96 IPR017884 -
Mal8g3032 307 PANTHER SWI/SNF COMPLEX-RELATED 28 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3032 Mal-Chr8 82215058 82229922 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal8g3032 Myb_DNA-binding 4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3032 - - gmx:100783949 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3032 8 82215058 82229922 Mal8g3032 8 82215058 82229922 ECH