Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3023 ATGGGTGTTTCCAACAAAACTCCTCAATTTCTCAACATGAACCCTCTTGGAAAGATTCCGGTATTGGAAACCCCTGTTGGTCCTGTCTTTGAGAGCAATGTCGTTGCTCGCTATGTTGCCCGATTGGGCCAAAACAATTTGTTTGGATCGTCTCTCATTGATCAGCCGCTTCAGGAGCAGAAACAAAGAAGAAGGACACGAAGCAACAACAGCGACGAACACCATCTCATTCTTGCCGATTCGCCGCCACTTGTATTGGGGATTGCCTCTGATTTTGCTTTTGTTGCTGTTCTGTAA 297 0.4613 MGVSNKTPQFLNMNPLGKIPVLETPVGPVFESNVVARYVARLGQNNLFGSSLIDQPLQEQKQRRRTRSNNSDEHHLILADSPPLVLGIASDFAFVAVL* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3023 98 MobiDBLite consensus disorder prediction 58 74 - -
Mal8g3023 98 PANTHER BNAC08G13770D PROTEIN 1 59 - -
Mal8g3023 98 Gene3D Glutaredoxin 4 46 - -
Mal8g3023 98 Gene3D - 47 63 - -
Mal8g3023 98 MobiDBLite consensus disorder prediction 53 74 - -
Mal8g3023 98 Pfam Glutathione S-transferase, N-terminal domain 5 41 IPR004045 -
Mal8g3023 98 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 47 IPR004045 -
Mal8g3023 98 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 59 IPR044628 GO:0004364
Mal8g3023 98 SUPERFAMILY Thioredoxin-like 5 42 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3023 Mal-Chr8 81279696 81280342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3023 1 60 Eukaryotic Initiation Factors Gene Family AT1G09640 68.852 2.87e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3023 K03233 - atr:18435694 90.8929