Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3005 ATGGATTTTGATGTTAGTGATCTCTTTCCCTTTGTGAGTAGCTACAAAGCTACAACCTTTACTATCCCTACCTCAATTTTTGAAACTCCATCTCAAACCCCAACCACCATCACAACCACCGCCACCGCCACCAATAATATCACACCATTTTACTTTGATGATTTTAGCTTTACCCAAGACAATAACCCAGTCCCTTTTTCCCAACTTAAACAAAATAATTTCATAGATCTAGACAAATTTAAAATCAATTTCAATCCCACTACAACTCTCCCTGCCCCAATCACCACTACCACCAGTATTCCAACCATCATTACAACCACCACTTCATCCCAAATCACCAATATCCCCACCCCTTCAACAACCACTATTCTCAGCCACATCACATGCAACACTACCACTAGTGTTCATGGTTCCAAACAAAATTTCACCTTTTTTGATTGTCCAACACTTATTGAACAACAACAGGTGAAGTCAAGTGACCATGAGCTAGAAAAAAAATTAACAACAAGGTCAAATTGGAATGCCATGAGCTACTTCAAATGTAACAGTTCTAAAGATTGTTTAGCAAAAAAACTAGTAGAAAAAAGCAACACCAAAGAGGACACTTATGTTGTGACGTTTGTTGGAGCGCACAACCATGAAAAACCAGCAAGAAAACGAAAATCTATTGTTGGGACCTCCAATAAAAAGTCATCAAAGACTAGATTGCCTGCTGTCGAAAATGCCAGGTTGTCACCAAATGTTGCAAAGTTTGGTGCGACTAATGTGAGGATGATGATGCAGTTCGATCATCCGAAGAGCAAAAATATTCAAATTTTCTCCGGTCAATCAGAAGAAAATGAACTTATAGCGACCCATTTACCCGTTGCAGGAGAAGTTGAAACATCTCCAAATGTTGAAAACTTGTGTTCACCTAATGTGATGAGGCTACAGTTTGATGATCCGAAGAGTAGCAATGCCCAGGTTTACACCAATGAATCACAAAATCTTCATTCAGAAGCCAAATTTATTGGAAACATTGACGACGACGAAGAAATTTGGATACAAAATATGGCAAATATGTCGGATGATTTCTTGTTGGATTTCAACCTCCTCAATGGTGGTGCGCTATTCCCTTAG 1119 0.3896 MDFDVSDLFPFVSSYKATTFTIPTSIFETPSQTPTTITTTATATNNITPFYFDDFSFTQDNNPVPFSQLKQNNFIDLDKFKINFNPTTTLPAPITTTTSIPTIITTTTSSQITNIPTPSTTTILSHITCNTTTSVHGSKQNFTFFDCPTLIEQQQVKSSDHELEKKLTTRSNWNAMSYFKCNSSKDCLAKKLVEKSNTKEDTYVVTFVGAHNHEKPARKRKSIVGTSNKKSSKTRLPAVENARLSPNVAKFGATNVRMMMQFDHPKSKNIQIFSGQSEENELIATHLPVAGEVETSPNVENLCSPNVMRLQFDDPKSSNAQVYTNESQNLHSEAKFIGNIDDDEEIWIQNMANMSDDFLLDFNLLNGGALFP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3005 372 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g3005 372 SUPERFAMILY WRKY DNA-binding domain 170 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g3005 372 Pfam WRKY DNA -binding domain 171 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g3005 372 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 177 367 - -
Mal8g3005 372 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 177 367 IPR044810 GO:0003700
Mal8g3005 372 ProSiteProfiles WRKY domain profile. 170 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g3005 372 SMART WRKY_cls 153 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g3005 372 MobiDBLite consensus disorder prediction 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3005 Mal-Chr8 80334928 80337251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3005 178 231 WRKY Transcription Factor Family AT5G52830 44.444 7.85e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g3005 WRKY 9.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3005 K18835 - mtr:MTR_6g053200 231.106