Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2961 ATGGTTATAGATAAGTATCCTTCGTTTATTTTGGAAGATGGAATGCAAATGCTGATTGGGTACAGGTGTGATCCAACTGATTATGAACTCGTTGATTATTATCTGTCAAGAAAAATTTGCAACAAACTTGTTCCAGTTTTCCTTTTAGAAGTAGATGTATTTCAACCTGAGCCATGGAAGCTGCCACAAGATAATAGGTGCTGTGAAAATATAACGTATTATTTCTCTAATATCTGGAACCTTATTAGATTCAAAAATATTAATACAAGACCAGCGGGAAACGATGAGTGGAGGAGGGTATTGAAAAAGAATGAGGCACTTCCTCTTTCAAACAAGCACGTCATTGCGGTGTTGACGCAATGGAAGATGGATGAATTTAGCATCAATCCAATAAATCATCAAATTAAGGTGGCAGCTGTAGGTGCTTATCGGATATTTAAGATGAAAGCTGCAAAATGTGAGAAGGACAAAGTCCCCACACAAACCGTAATTGATTTCACAATAGATGATGGAAGTGTCTCAGCCCCTCCAGCTCCCTCTCCATGA 546 0.3828 MVIDKYPSFILEDGMQMLIGYRCDPTDYELVDYYLSRKICNKLVPVFLLEVDVFQPEPWKLPQDNRCCENITYYFSNIWNLIRFKNINTRPAGNDEWRRVLKKNEALPLSNKHVIAVLTQWKMDEFSINPINHQIKVAAVGAYRIFKMKAAKCEKDKVPTQTVIDFTIDDGSVSAPPAPSP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2961 181 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 148 - -
Mal8g2961 181 SUPERFAMILY NAC domain 13 130 IPR036093 GO:0003677|GO:0006355
Mal8g2961 181 Gene3D NAC domain 26 154 IPR036093 GO:0003677|GO:0006355
Mal8g2961 181 ProSiteProfiles NAC domain profile. 17 158 IPR003441 GO:0003677|GO:0006355
Mal8g2961 181 Pfam No apical meristem (NAM) protein 20 104 IPR003441 GO:0003677|GO:0006355
Mal8g2961 181 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2961 Mal-Chr8 79367585 79368585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2961 20 76 NAC Transcription Factor Family AT1G69490 43.103 2.57e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g2961 NAM 6.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2961 - - cam:101501671 127.102