Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal8g2931 | ATGAAACAAACAATAGATGGGAAATGGGCCCACTTGGTGCGTGCTTTACTTGTTCCTAAAGTGTTTTTTGTAGATCCAGAAGGGAGAGAAGGGATTGATTGTTCTAAGGTTCCAAATAAGAGGTGGTTGGAGAAGTGCTATGTATGTGGGTGTTGTGATGGGTGTGCTTTGAGTTTTCATATTACTTGTGGAATCAAAGAGGATCTTTGTATTGAGTATAAGGACGGGAAGAAAGACAATGAAGAGGAAGCAGAATCCAAAGAGAAATGCAAGAAACCAAAACATGGTGATGATGCGGCGGATGCGGAGCCATCTACTCGAGTGGAAAGAGATGATTTCTATGAGGACATAGGAGAAAGCCAAACTGCAGAAGAAATAGTCCACTGA | 387 | 0.4186 | MKQTIDGKWAHLVRALLVPKVFFVDPEGREGIDCSKVPNKRWLEKCYVCGCCDGCALSFHITCGIKEDLCIEYKDGKKDNEEEAESKEKCKKPKHGDDAADAEPSTRVERDDFYEDIGESQTAEEIVH* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal8g2931 | 128 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 1 | 92 | - | - | |
| Mal8g2931 | 128 | Pfam | PHD-zinc-finger like domain | 1 | 77 | - | - | |
| Mal8g2931 | 128 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 97 | IPR013083 | - | |
| Mal8g2931 | 128 | MobiDBLite | consensus disorder prediction | 82 | 128 | - | - | |
| Mal8g2931 | 128 | PANTHER | PHD FINGER PROTEINS | 1 | 92 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal8g2931 | Mal-Chr8 | 78586689 | 78587442 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal8g2931 | 1 | 78 | C2H2 Transcription Factor Family | AT3G14740 | 57.471 | 5.98e-29 | 105 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal8g2931 | K11380 | - | jre:109011747 | 127.872 |