Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2922 ATGGTCACATTGGAATGTCATGTGAGGGCAAATAAGCTTTCAAAAGATTGGTGGGCGTGGAGAAAATATGGGCAAAAAACCATTAAAGGGTCCCCTCATCCAAGGAGCTACTTCAAATGTAACAGTTCTAAGGATTGTTTAGCAAGAAAACTAATAGAAAAAAGCGACACCAAAGAGGACACTTATGTTGTGACGTTTGTTGGAGCGCACAACCATGAAAAACCAGCAAGAAAACGAAAATCTATTGTTGGGACCTCCCAGAACAAGTCATCAAAGACTAGATTGTCTGCTGTCGGAAATGTCAGAGAAATTGAATCATCTCCCAATGGTGAAAACTTGTGTTCACCTAATGTGATGATGCTACATTTTGATGACCTGAAGAGTAGCAATGCCCAGGTTTACGCCAATGAATCACAAATCCTTCATTCAGAAACTAAAGTTATAGGGAACATCAATGACGATGAAGTAATTTTGATGCAAAACATGGCAAATATGTCGGATGATTTCTTGTTGGATTTCAACCACCTCAATGCTGCTGCGCTATTCCCTTAG 552 0.3986 MVTLECHVRANKLSKDWWAWRKYGQKTIKGSPHPRSYFKCNSSKDCLARKLIEKSDTKEDTYVVTFVGAHNHEKPARKRKSIVGTSQNKSSKTRLSAVGNVREIESSPNGENLCSPNVMMLHFDDLKSSNAQVYANESQILHSETKVIGNINDDEVILMQNMANMSDDFLLDFNHLNAAALFP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2922 183 ProSiteProfiles WRKY domain profile. 9 75 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2922 183 MobiDBLite consensus disorder prediction 75 95 - -
Mal8g2922 183 MobiDBLite consensus disorder prediction 81 95 - -
Mal8g2922 183 Pfam WRKY DNA -binding domain 16 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2922 183 SMART WRKY_cls 14 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2922 183 SUPERFAMILY WRKY DNA-binding domain 11 75 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2922 183 Gene3D WRKY domain 4 76 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2922 183 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 14 180 - -
Mal8g2922 183 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 180 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2922 Mal-Chr8 78457365 78458897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2922 6 131 WRKY Transcription Factor Family AT5G52830 41.270 1.24e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g2922 WRKY 3.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2922 - K13425 mtr:MTR_6g053200 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2922 8 78457365 78458897 Mal1g2108 1 27590498 27591738 PCT