Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2896 ATGTCTGAAGCCAGAAGTTACATGTGGAGAAGGGCAGTTATGGACATTGACCTTAACCGAGCACCTGCGGCTGATGAGAATCCGATTGTTGACAATCCGTCTGGTGAGCAGGAGAGACCTTCAATTCAGACTCAGTTGTGGCATGACCTGCAGACACTTGCACTATTTCTTCCTATGGAGGCCATTGATGATGATGATGATGATGTTGTGGAAATTTCCTCTAGGGCATTTTATGAGGCTAAAAAAAATTCTAGAAGAAATCGCTTGACGACCATTGATGATGATGATGCTATGGATGTGGACTTAGAAGGAGAGCAGCCTCCAAAGAAACTTGACTTCAGCTGTCCTATATGCCTGGGTCCTTTCGTTGAAGAAATGACGACAAAGTGTGGCCATATTTTTTGCAAGACTTGTATCAAGACTGCTATCAAGGCTAAAGCTAAATGTCCTACCTGCAGAAAAAAGACTAATTTGAGACAAATTATAAGGGTGTATCTCCCAACAACTGATTGA 513 0.425 MSEARSYMWRRAVMDIDLNRAPAADENPIVDNPSGEQERPSIQTQLWHDLQTLALFLPMEAIDDDDDDVVEISSRAFYEAKKNSRRNRLTTIDDDDAMDVDLEGEQPPKKLDFSCPICLGPFVEEMTTKCGHIFCKTCIKTAIKAKAKCPTCRKKTNLRQIIRVYLPTTD* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2896 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 169 IPR013083 -
Mal8g2896 170 Pfam Zinc finger, C3HC4 type (RING finger) 115 152 - -
Mal8g2896 170 PANTHER RING ZINC FINGER-RELATED 4 101 - -
Mal8g2896 170 PANTHER RING ZINC FINGER-RELATED 105 170 - -
Mal8g2896 170 ProSiteProfiles Zinc finger RING-type profile. 115 153 IPR001841 -
Mal8g2896 170 ProSitePatterns Zinc finger RING-type signature. 130 139 IPR017907 -
Mal8g2896 170 PANTHER ELFLESS, ISOFORM B 4 101 - -
Mal8g2896 170 SMART ring_2 115 152 IPR001841 -
Mal8g2896 170 PANTHER ELFLESS, ISOFORM B 105 170 - -
Mal8g2896 170 SUPERFAMILY RING/U-box 114 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2896 Mal-Chr8 77113010 77113522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2896 64 169 C3H Transcription Factor Family AT3G07200 45.385 1.30e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2896 K22651 - gmx:100306616 129.798