Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2895 ATGGACATTGACCTTAACCGAGCACCTGCGGCTGATGAGAATCCGATTGTTGACAATCCGTCTGGTGAGCAGGAGAGACCTTCAATTCAGACTCAGTTGTGGCATGACCTGCAGACACTTGCACTATTTCTTCCTATGGAGGCCATTGATGATGATGATGATGATGTTGTGGAAATTTCCTCTAGGGCATTTTATGAGGCTAAAAAAAATTCTAGAAGAAATCGCTTGACGACCATTGATGATGATGATGCTATGGATGTGGACTTAGAAGGAGAGCAGCCTCCAAAGAAACTTGACTTCAGCTGTCCTATATGCCTGGGTCCTTTCGTTGAAGAAATGACGACAAAGTGTGGCCATATTTTTTGCAAGACTTGTATCAAGACTGCTATCAAGGCTAAAGCTAAATGTCCTACCTGCAGAAAAAAGACTAATTTGAGACAAATTATAAGGGTGTATCTCCCAACAACTGATTGA 474 0.4219 MDIDLNRAPAADENPIVDNPSGEQERPSIQTQLWHDLQTLALFLPMEAIDDDDDDVVEISSRAFYEAKKNSRRNRLTTIDDDDAMDVDLEGEQPPKKLDFSCPICLGPFVEEMTTKCGHIFCKTCIKTAIKAKAKCPTCRKKTNLRQIIRVYLPTTD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2895 157 ProSitePatterns Zinc finger RING-type signature. 117 126 IPR017907 -
Mal8g2895 157 Pfam Zinc finger, C3HC4 type (RING finger) 102 139 - -
Mal8g2895 157 PANTHER ELFLESS, ISOFORM B 2 88 - -
Mal8g2895 157 PANTHER ELFLESS, ISOFORM B 92 157 - -
Mal8g2895 157 MobiDBLite consensus disorder prediction 1 27 - -
Mal8g2895 157 PANTHER RING ZINC FINGER-RELATED 2 88 - -
Mal8g2895 157 SUPERFAMILY RING/U-box 101 145 - -
Mal8g2895 157 SMART ring_2 102 139 IPR001841 -
Mal8g2895 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 156 IPR013083 -
Mal8g2895 157 PANTHER RING ZINC FINGER-RELATED 92 157 - -
Mal8g2895 157 ProSiteProfiles Zinc finger RING-type profile. 102 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2895 Mal-Chr8 77078053 77078526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2895 51 156 C3H Transcription Factor Family AT3G07200 45.385 1.37e-30 107