Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2854 ATGGATTTTGATGATTGTGATATCTTTTCCTTTGTGAGTAGCTACAAAGCTACCCCCTTTACTACCCCTACCTCCATTTTTGAAACTCCAGCTCAAACCCCAACCACCATCACTACCACCACCACCAATAACATCGTAGCCCCTCAAAACATCACACCATTTTACTTTGATGATTTTAGCTTTACCCAAGATGATAACTTAGTCCCTTTTTCTCCACTTAAACAAAATGATTTCATAGATCTAGACAAATTTAAAATCAATTTCAATCCCACCTCAACTCTCCCTGGCCCCATCCCCACTACCACCGGTGTCCCAACCATCATTTCAACAACTTCATCCCTGATCTCCAATATCCCCACCCCTTCAACCACCACTATTCTCAGCAACATAACATGCAACACAATCACTAACACTAGTGTTCATGGTTCCAGACAAAATTTCACCTTTTTTAGTTGTCCAACACTCATTGAACAACAACAGGTGAAACCAAATGACCATGAGCTAGAAAGAAAATTAACAACAAGGTCACATTGGAATGCCATGAGCTACTTCAAATGTAACAGTTCTAAAGATTGTTTAGCAAAAAAACATGTTGAAAAAAGTGACACCAAAGAGGACACTTATGTTGTGACGTTTGTTGGAACGCACAACCATGAAAAACCAACAAGAAAACGGAAATCTATTGTTGGGACCTCCCATAACAAGTCATCAAAGACTAGATTGTCCACTGTCGGAAATGCCAGGTTGTCACCAAAAGTTGCAAAGTTTGGTTCGACTAATGTTAGGATGATGATGCAGTTTGAGCATCCGGAGAGCAGAAATATACAAGTTCTCTCCGGTCAATCAGAAACCCCTTATTCAGAAACTGAACTTATAGAGACCCATTTACCCGCTGCAGGAGAAGTTGAAACATCTCCAAATGTTGAAAACTTATGTTCACCTAATGTGACGAGGCTACAACTTGATGATCCGAGGAGTAGCAATGCCCAGGTTTACACTAGTGAATCACAAGTCCTTCATGCAGAAGCAAAATTTATGGGAAACATTGATGACGACGAAGAAATTTTTATACAAAATATGGCAGATATGTCAGATGATTTCTTGTTGGATTTCAACCTCCTCAATGATGGTGCGCTATTCCCTTAG 1146 0.3997 MDFDDCDIFSFVSSYKATPFTTPTSIFETPAQTPTTITTTTTNNIVAPQNITPFYFDDFSFTQDDNLVPFSPLKQNDFIDLDKFKINFNPTSTLPGPIPTTTGVPTIISTTSSLISNIPTPSTTTILSNITCNTITNTSVHGSRQNFTFFSCPTLIEQQQVKPNDHELERKLTTRSHWNAMSYFKCNSSKDCLAKKHVEKSDTKEDTYVVTFVGTHNHEKPTRKRKSIVGTSHNKSSKTRLSTVGNARLSPKVAKFGSTNVRMMMQFEHPESRNIQVLSGQSETPYSETELIETHLPAAGEVETSPNVENLCSPNVTRLQLDDPRSSNAQVYTSESQVLHAEAKFMGNIDDDEEIFIQNMADMSDDFLLDFNLLNDGALFP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2854 381 Pfam WRKY DNA -binding domain 178 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2854 381 Gene3D WRKY domain 157 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2854 381 SUPERFAMILY WRKY DNA-binding domain 177 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2854 381 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 182 376 - -
Mal8g2854 381 SMART WRKY_cls 158 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2854 381 MobiDBLite consensus disorder prediction 216 242 - -
Mal8g2854 381 ProSiteProfiles WRKY domain profile. 175 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2854 381 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 182 376 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2854 Mal-Chr8 74637613 74639976 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2854 183 236 WRKY Transcription Factor Family AT5G52830 46.296 9.12e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g2854 WRKY 3.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2854 - K18835 mtr:MTR_6g053200 232.646