Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2838 ATGGAAGCCTTCATGATATTTTTGCATGAGAAAAAATCCCCACCGCCCTTTTATTGGAATGACCGGTTTAAGATTTCTGTTGGAATTGCTAGAGGATTAGGACATCTGCATTATAATTGTATCCTACCCATAGTGCACGGAGACATCAAACCAAAGAACATAATTCTTGATGTGGAGCCTATTATTGCTGATTTTGGTACTCGCCTGCTATGCGACCTGTCTGAGGATTCTAATAGTCATTCTGAAAACGGACAAGTGTTTTCATTGCACGTTATTGGTACCCCAGGTTATATTCACCAGACAAAGTTCACCACTTTAGTCAGCTGGGCTAGATCTATATGGCTTGAAACAGGCAAAATTGAGAAGATTGTTGATTCATACCTTGCAAGTTTATTTCCCAATTCAGCAACACTGACCAAGCAAATCACGGCAGTGTTTTTGTTGGCATTACAATGCACAGAAAGGGAACTACGAAAGAGACCAACCATGAAAGATGTTATTGGCTTGTATGAAAATGACTTGTTTAAGTGGAAGTGTGGTGATGTTGAAGCTGCAACACAGCACTAG 567 0.4021 MEAFMIFLHEKKSPPPFYWNDRFKISVGIARGLGHLHYNCILPIVHGDIKPKNIILDVEPIIADFGTRLLCDLSEDSNSHSENGQVFSLHVIGTPGYIHQTKFTTLVSWARSIWLETGKIEKIVDSYLASLFPNSATLTKQITAVFLLALQCTERELRKRPTMKDVIGLYENDLFKWKCGDVEAATQH* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2838 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Mal8g2838 188 Pfam Protein tyrosine and serine/threonine kinase 7 105 IPR001245 GO:0004672|GO:0006468
Mal8g2838 188 Gene3D Transferase(Phosphotransferase) domain 1 5 127 - -
Mal8g2838 188 PANTHER OS08G0446200 PROTEIN 7 98 - -
Mal8g2838 188 PANTHER OS08G0446200 PROTEIN 103 180 - -
Mal8g2838 188 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 103 180 - -
Mal8g2838 188 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 98 - -
Mal8g2838 188 SUPERFAMILY Protein kinase-like (PK-like) 12 168 IPR011009 -
Mal8g2838 188 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2838 Mal-Chr8 73842155 73843003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2838 19 172 Receptor kinase-like Gene Family AT1G73080 32.143 2.83e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal8g2838 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2838 - - mtr:MTR_5g087360 246.899