Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2837 ATGACTAGAACTAGTTGTTATAGCAGTAGAATTGTCACACACTTATTGATTATTTCCTTTTTGCATGATGCTATTGCTCTTAACTCTGAGGCTTTGACTCTGTTGTCACTCAAGACACAATGGTCCTTTCTTCCTCTTATCATCAACTCTAGCTGGAATGCTTCTGATTCCAATTCATGCTCATGGGTTGGTGTTCAATGTGACCATACCAACAATGTCATTTCCATTAATCTCACTAATCATGGGATTTTTGGTCAACTTGGACCACAAATTGGAAACCTTTATCATTTGCAGAACCTTTTGTTGTTTGGTAATGGTTTCTCAGGAAAAAATTTAGATCTTTCTGAGAACAGATTCAGTGGAAAGATACCATATAGTTTCAAAAAGTTGCAAAATTTACGGTTTATGAATTTGTCTTCTAATCTTTTGACTGGTGAAATTCCAGATTCATTGTTTAAAGGGTTAATAGTGAGCCTACACAACAACCTACTTAGCGGTCCTATCCCAGCAAACATTGGAAACTTGACTCATCTATTGAGGTTGTATCTATATGAGAATCAGTTGTCAGGGACTATTCCCTCATCTCTTGGTAATTGCAGTAAATTAGAGGACCTCGAATTGTCTTTCAATAGTTTGAGAGGCGAAATTCCGGTCAGTGTTTGGAGAATTCAAAGTCTTGTGCACATCTTGGTTCACAGCAACAGTCTCTCCGGGGAACTACCTTTGGAGATGACAAAGCTCAAGTATCTAAGAAATATCTCATTGTTTGATAATCAGTTCTCAGGAGTCATACCTCAAAGTTTGGGAATCAACAGCAGCTTATTGAAGTTGGACGGTATGAATAACAAGTTCAGTGGCAATATCCCACCCAATCTTTGCTTTGGAAAGCATTTGTTAGTGCTAAACATGGGAATCAATCAACTTCAAGGCAGTATACCTTCTGATATAGGAAGATGTGCAACTCTGATGAGGTTGTTTCTCAATCAAAATAATTTCACCGGTTCTCTTCCCGATTTTGGAAGTAATCTGAACCTGAAATACATGGATGTGAGCAAGAACAATATCAGTGGACCGATTCCATCAAGTTTGGGAAATTGCACAAATCTTACATATATTAATTTGTCAAGGAACAAGTTTGCTGGGCTCATACCATCAGAGCTTGGAAACCTTGCAGATCTTCTGTCGAATTGTACTAAAATGGATCGTTTTGATGTGGGATTTAATTTCCTGAATGGATCACTCCCATCAAGTTTGAGAAGTTGGAGAAACATAACCACAATGATTTTAAGAGAAAATTACTTCACAGGAGGTATCCCAGGGTTTTTGGAAAATTTTAGAAACCTTTGTGAGTTACAACTTGGTGGAAATTTGTTTGGAGGCCAAATTCCTCGATCGATGGGGACATTGCATAATCTATTCTATGGATTGAATCTGAGTGCTAATGCATTGACAGGCGGAATTCCTCAACAAATTCAGAATCTAGGACTGCTGCAAAGTCTGGACATATCATTGAACAATTTAACAGGAAGTATATATGCTCTTGGAGGTCTTGTTTCATTAATTGAGGTCAATATTTCTTACAATCTCTTCATTGGTTTTGTACCATTAAATCTAATGAGGTTATTGAATTCCTCACCATCATCATTCATGGGTAATCCTCGCTTATGTGTCAGTTGTTTGAGTTGCAATAGAACTTGTTATACAAATCCAAGTGTCTACAGATCAACTGGTCACAAAGGTATCAATATTAGTAATGTTCATATTGTGATGATAGAGCTTGGATCCACAATATTGATTTATTTTGTGTTGGTAATAGCAATTCTAATATATCTCCATAGACAAGAAATTAAAAAGGCCTCTGATCTTAAGAATTATTTTTTTAATGTAAGTGGAAGAGGAAGTGTTGAATTCATAAATGACACTGGTTATGAATTAAAGATCTCAACTAGAAATGAGATCTCTGACCTTCAAGAGAAAGTGTTGGAGGCTACAGAGAACCTAACTGATCAGTATATAATTGGCAGAGGAGCACATGGTATTGTGTACAAAGCCATGATTGGTCAACAGGTTTATGCTGTAAAGAAGGTTGAGTTTGGATGGAACCAGCAAAAGAGGTTAAATATCACGCACAACGAAATTGAAGTCCTCGGGATCTTTAAGCATCGAAACTTGATCAAATGCGCTGGCTATTGGATTGGAAAGGACTATGGTTTAATAGCAGCTGGAGTTGCTCAAGGACTAGCATATCTGCATTATGATTGTGTTCCACCAATATTGCACCTAGACATCAAACCAAAGAACATACTTGTTAATGACAATATGGAACCTATTATAGCTGATTTTGGCACTGCCCTATGCAAGAAGCTTTTTGAGGATTCTAATAGTTATTGTGAAACCAGGAAAATGCTTTCGTCGCGTGTTATTGGTACCCCTGGCTATATTGCACCTGAGAATGCATATGATATAGTGCCGGGAAGAAAGTCTGATGTATATAGCTACGGAGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAATTATTAGTTCCCTCTATGAGTGATGAGGCAAAGGAGACCCACATAGTGACCTGGGCTAGATATGTATTGACGAACACAGGCAAAATTGAGAAAATTGTTGATCCATACCTCGTAAGTGAATTTCCCAATTCACTAAGACTAGCCAAGCAAGTCAATGCAGTGCTTTCGTTGGCATTACAATGCACAGAGAAGGATCCACGAAAGAGGCCGACCATGAAAGGTGTTATTGGTTTTTTTAATAAGAACTTGTTTAAGCTGATGTGTGATGAGGTGCAATATGGTTATGGACTTGTAATTAAACTCATGGGAAATGGTATGATTCATTCTGTAAAATTTGTCAGGGTAGCTGCTCTAATTCTTCCAAAAATAACCTATGCTTGGCCTAGTTTGATCTTCATTCCCTCTATTACTGGTCCAATGCTTACCAAACCTTTCAACTGGTTTTTCCTACGGCGTTGGGGTCAATATAGACACTTGCAGAAATCCTTGTACTCACAGACTAAACCATACTACTCTATAAACACGGATCAAACCGAGGCCACTGTCCAAATTAGTGAATAG 3096 0.3776 MTRTSCYSSRIVTHLLIISFLHDAIALNSEALTLLSLKTQWSFLPLIINSSWNASDSNSCSWVGVQCDHTNNVISINLTNHGIFGQLGPQIGNLYHLQNLLLFGNGFSGKNLDLSENRFSGKIPYSFKKLQNLRFMNLSSNLLTGEIPDSLFKGLIVSLHNNLLSGPIPANIGNLTHLLRLYLYENQLSGTIPSSLGNCSKLEDLELSFNSLRGEIPVSVWRIQSLVHILVHSNSLSGELPLEMTKLKYLRNISLFDNQFSGVIPQSLGINSSLLKLDGMNNKFSGNIPPNLCFGKHLLVLNMGINQLQGSIPSDIGRCATLMRLFLNQNNFTGSLPDFGSNLNLKYMDVSKNNISGPIPSSLGNCTNLTYINLSRNKFAGLIPSELGNLADLLSNCTKMDRFDVGFNFLNGSLPSSLRSWRNITTMILRENYFTGGIPGFLENFRNLCELQLGGNLFGGQIPRSMGTLHNLFYGLNLSANALTGGIPQQIQNLGLLQSLDISLNNLTGSIYALGGLVSLIEVNISYNLFIGFVPLNLMRLLNSSPSSFMGNPRLCVSCLSCNRTCYTNPSVYRSTGHKGINISNVHIVMIELGSTILIYFVLVIAILIYLHRQEIKKASDLKNYFFNVSGRGSVEFINDTGYELKISTRNEISDLQEKVLEATENLTDQYIIGRGAHGIVYKAMIGQQVYAVKKVEFGWNQQKRLNITHNEIEVLGIFKHRNLIKCAGYWIGKDYGLIAAGVAQGLAYLHYDCVPPILHLDIKPKNILVNDNMEPIIADFGTALCKKLFEDSNSYCETRKMLSSRVIGTPGYIAPENAYDIVPGRKSDVYSYGVVLLELITRKKLLVPSMSDEAKETHIVTWARYVLTNTGKIEKIVDPYLVSEFPNSLRLAKQVNAVLSLALQCTEKDPRKRPTMKGVIGFFNKNLFKLMCDEVQYGYGLVIKLMGNGMIHSVKFVRVAALILPKITYAWPSLIFIPSITGPMLTKPFNWFFLRRWGQYRHLQKSLYSQTKPYYSINTDQTEATVQISE* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2837 1031 SUPERFAMILY Protein kinase-like (PK-like) 657 921 IPR011009 -
Mal8g2837 1031 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Mal8g2837 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Mal8g2837 1031 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Mal8g2837 1031 SUPERFAMILY L domain-like 28 152 - -
Mal8g2837 1031 SMART LRR_typ_2 175 199 IPR003591 -
Mal8g2837 1031 SMART LRR_typ_2 130 154 IPR003591 -
Mal8g2837 1031 PANTHER OS08G0446200 PROTEIN 739 934 - -
Mal8g2837 1031 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 739 934 - -
Mal8g2837 1031 Coils Coil 646 666 - -
Mal8g2837 1031 ProSiteProfiles Protein kinase domain profile. 667 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2837 1031 Gene3D Ribonuclease Inhibitor 275 567 IPR032675 -
Mal8g2837 1031 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 739 - -
Mal8g2837 1031 Pfam Protein kinase domain 738 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2837 1031 Gene3D Ribonuclease Inhibitor 156 274 IPR032675 -
Mal8g2837 1031 Gene3D Ribonuclease Inhibitor 26 155 IPR032675 -
Mal8g2837 1031 SUPERFAMILY RNI-like 297 563 - -
Mal8g2837 1031 Gene3D Transferase(Phosphotransferase) domain 1 738 935 - -
Mal8g2837 1031 Gene3D Phosphorylase Kinase; domain 1 647 737 - -
Mal8g2837 1031 PANTHER OS08G0446200 PROTEIN 7 739 - -
Mal8g2837 1031 SMART serkin_6 667 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2837 1031 SUPERFAMILY L domain-like 157 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2837 Mal-Chr8 73820920 73840283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2837 112 921 Receptor kinase-like Gene Family AT1G73080 44.023 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal8g2837 Pkinase 4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2837 - - mtr:MTR_5g087370 1456.43