Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2832 ATGTCAGCGGCGTCGCCGTCTCCGGCTTCCTCTAAAACCATCCAATCGCCTTTCTCAGCAACTGCTCCGCCACCGCAACAACAATTCTCCTCCCCTTCACCTAACACTAACACTTCAACTGCACCTCATCCAGCAACATCACCACCTCCGTCCACCCAATCAGCTCCAACTCCGACTTCACCAGCTCCTCGTGCTTCACCTCGTGTAGTTCCTCCATCTTCACCACCTCGTTCCTCACCGCCACCACAATCACCCGTTCCTTCAACAATCTCGCCTCCGCCCACTGTGACACCACCCAGACGTTCACCTCCACCACCCCCCAAACACTCATCTCAAACTCCACCGCATAGGTCATCACTACCATCACCACCACCACGATTACAACCTCCACCGCCTAGGTCATCACTACAACCACCATCACCACCACCAACATCATCAACCCCTCCTCCTGCCAATTCAACACCGAGGCTATCTCCTCCCTCACCCTCCTCAATCATTCAATTCTCTCCGCCGCCTCCGCCGCTGCAGAACGGATCAGAAAACTCAAGTCCTCAAACCGGAATTAGTTCTGGCGCTGTAGTTGCTATTGCTGTGTTTGGTGGAATTCTAATGCTTGGCTTCATTGGAGTTTCTATCTGGTGCTTCAGAAGGCAAAGCAAAAAGGATTCTCCTAATGATGGTTATGTCATGCCTTTCACTCTTCCCTCCTCAACTGAATCAGATTCTCTTGTAAGCAGTGATGTTGTGCATACTCCATCTGACCCTGGTGGTGGAATGGGCCACTCAAGGAACTGGTTTTCATATGAAGAACTAATCAAGGCCACAAATGGTTTCTCGACTCTGAATCTTTTGGGAGAAGGTGGATTTGGTTCTGTGTATAAAGGAAATTTACCTGATGGGAGAGAGATAGCAGTGAAACAACTCAAAATTGGTGGAAGTCAAGGGGAGAGAGAATTCAAAGCCGAAGTCGACATTATTAGTCGCATACATCATCGCCATTTGGTTTCTTTAGTTGGATACTGCATTCAAGATAACAGAAAAATACTTGTCTATGACTATGTCCCTAACAATACCCTTTATTTTCATCTACATGAAGGTCAACCTGTGCTGGAATGGGAAAAACGTGTTAAAATCGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCATAGAGATATCAAGCCATCAAACATTCTTTTGGATTACAACTACGAAGCTCGTGTCTCAGATTTTGGCCTTGCCAAATTATCTCAAGATGCAAATACACATGTATCGACGCGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCGTCAAGTGGAAAATTGACTGACAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAACTCATTACCGGACGTATGCCCGTAGATCCATCACAAATGGGAGATGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAGTGATGCACTTGAAACTGGGGAATTTGAGAGTTTGGTAGATCCAAAGCTAGGGAAGAACTACATTGATAGTGAAATGTTTTGCATGATTGAAGTTGCTGCTGCTTGTGTTCGACATTCAGCTTCTAAGAGACCTCGAATGGGACAGGTTGTTAGAGCTTTCGAAAGCTTAGCAACTTCAGATCTAACAAATGGAATGCGAGTTGGTGAAAGCCAGGCATTTGAATCTGCACAACAATCTGAAGAAATTAGATTGTTTCGGAGGATGGCATTTGGTAGTCAAAATTATAGCTCCAAATTTTTTAATCACACTAGCTTGCGTATGTAA 1812 0.4553 MSAASPSPASSKTIQSPFSATAPPPQQQFSSPSPNTNTSTAPHPATSPPPSTQSAPTPTSPAPRASPRVVPPSSPPRSSPPPQSPVPSTISPPPTVTPPRRSPPPPPKHSSQTPPHRSSLPSPPPRLQPPPPRSSLQPPSPPPTSSTPPPANSTPRLSPPSPSSIIQFSPPPPPLQNGSENSSPQTGISSGAVVAIAVFGGILMLGFIGVSIWCFRRQSKKDSPNDGYVMPFTLPSSTESDSLVSSDVVHTPSDPGGGMGHSRNWFSYEELIKATNGFSTLNLLGEGGFGSVYKGNLPDGREIAVKQLKIGGSQGEREFKAEVDIISRIHHRHLVSLVGYCIQDNRKILVYDYVPNNTLYFHLHEGQPVLEWEKRVKIAAGAARGIAYLHEDCNPRIIHRDIKPSNILLDYNYEARVSDFGLAKLSQDANTHVSTRVMGTFGYVAPEYASSGKLTDKSDVYSFGVVLLELITGRMPVDPSQMGDESLVEWARPLLSDALETGEFESLVDPKLGKNYIDSEMFCMIEVAAACVRHSASKRPRMGQVVRAFESLATSDLTNGMRVGESQAFESAQQSEEIRLFRRMAFGSQNYSSKFFNHTSLRM* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2832 603 MobiDBLite consensus disorder prediction 1 42 - -
Mal8g2832 603 Pfam Protein kinase domain 279 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2832 603 SUPERFAMILY Protein kinase-like (PK-like) 261 548 IPR011009 -
Mal8g2832 603 MobiDBLite consensus disorder prediction 43 157 - -
Mal8g2832 603 MobiDBLite consensus disorder prediction 164 178 - -
Mal8g2832 603 PANTHER BNACNNG34790D PROTEIN 16 596 - -
Mal8g2832 603 SMART serkin_6 278 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2832 603 CDD STKc_IRAK 284 552 - -
Mal8g2832 603 Gene3D Phosphorylase Kinase; domain 1 256 353 - -
Mal8g2832 603 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 596 - -
Mal8g2832 603 ProSiteProfiles Protein kinase domain profile. 278 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2832 603 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Mal8g2832 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Mal8g2832 603 Gene3D Transferase(Phosphotransferase) domain 1 354 572 - -
Mal8g2832 603 MobiDBLite consensus disorder prediction 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2832 Mal-Chr8 73272622 73276364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2832 168 599 Trihelix Transcription Factor Family AT5G38560 60.349 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal8g2832 Pkinase 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2832 - - mtr:MTR_0194s0030 813.527