Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2824 ATGTGTCCAATGAGTCATCCTTTAATGATGGATGGTTGGGAAAAGCTTAAAAGTTTCTATGATATGTCAACTTTTACAAAGCTAGAACTTCTCTACTTTGGAAATGATATCTTTCAAATTAAGATCGGAAATGTTATACATAATACTGACGATATTCCAAGTTTTCATAGTCGCAGTACTGCACCAGGGAAAACCAAGTATTTTGACTTCACTCTTGAAGGAAATGGATCGTTGCTTGACCCATATTTGGTTCTTCATGAAGATTTTGCTGAATATGTCCCCGAAAATGATTTTGAATATCTTGTGTTATCCGGTAAGAAAGGCCAAAAGATTGATTGTGAGATAACTACCGATGACCAATCTGATCCTAGGTTTTATATTGAACATGGCTGGCCTGAATTTTGCGAGGACAATGAATTTGAAGTTGGTGATCATATTCGCTTTAAGTTTGCATCTCTTAGCTATTCTCACATGGCTAATGTTTACAAGATAACTATGTAG 501 0.3553 MCPMSHPLMMDGWEKLKSFYDMSTFTKLELLYFGNDIFQIKIGNVIHNTDDIPSFHSRSTAPGKTKYFDFTLEGNGSLLDPYLVLHEDFAEYVPENDFEYLVLSGKKGQKIDCEITTDDQSDPRFYIEHGWPEFCEDNEFEVGDHIRFKFASLSYSHMANVYKITM* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2824 166 Pfam B3 DNA binding domain 83 150 IPR003340 GO:0003677
Mal8g2824 166 SUPERFAMILY DNA-binding pseudobarrel domain 82 156 IPR015300 -
Mal8g2824 166 Gene3D - 60 163 IPR015300 -
Mal8g2824 166 ProSiteProfiles B3 DNA-binding domain profile. 68 166 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2824 Mal-Chr8 72826401 72827179 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal8g2824 B3 1.1e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2824 - K07175 mtr:MTR_1g054495 70.8626