Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2822 ATGACAAACTTACTTAAGCTCAAACCCGGACGGATGAACTATTCAATAATGGTAAGAATAGTTCGTACTTGGAATGTCGAAAACAGCCTCATTGGCGGTAAAATTAATGCTATAGAAATGTTGTTGCTTGATCGTGCGGACGATAAAATGCATGCCACTGTTCCTTCTCAATCCGTTGATCGTGTGAAACCTCTCTTAGCTGAAGGACGTGTTTATATTATTTCTATCTTTGAGGTGGTGCCAAATATAAGAGACTTCATGTCTACTTCCAACAAGTTCCGAATCGTTGTTCAACCTAGCACTGAGTTTTTGTTAACTGGGAGTTCACACATTCACCTATATGGCTTTTCAATTGCTTCTTCAAGTGATATAGTCAAGTGTAGATTTGGCTATAGCTACTCTATTGATGTTATTGGTGTTATTACTGCCATTCACCATGACCACTACGATAATGCTGAAGATAGTTTGAGTACGGTCATAAAATTTGAAGGGAAATTTGAGTGTGCTCTATATGGGAAATATGTTGTGGATTTTCAAAATATGCTCAAGAAAGCAAAAAACGGTTTACCTGTCATCGTCATGCTATTTGCCAGAATTTCGAGCCATAATGGATCTGCTGTTGTACAAAATGAAAAAGATTTGACTAGGCTTTTCGTAAATCCTGAATTTGCTGAAATCGTGCAGTACCGAAAGAGCTTGGTAATGCATGAGCTGCAATCTCCTCTTACGAAGCACAAATTTTCAGCGGAACCTATGAAGGGTGCAACTTTGGCTGTTGAAAGAAATTATCTGAAAAAAACAATAAGTCAGCTTCTAGCTACTCCTGAACTTGGTATATTTATCGTTTGTGCCAAAATTATGGGATTTCTCAGGGCTGACAGATTTTGGTTGAATCGCGAAAGTCTTGATAAACTAAACGGAAAAGATTTTATCTTCACAGTGAAAAAAAGTCATCCTACCTATCGTTCAACATATCATGATTTTGAAGTTTTGGAAATGTCCAATGATCTTGAAGTCATCCGTTCATATGATTCTATTGGAATTAGTTACACTCCCACCAAGCAAGCAATTTTCAAGCCAACCTTTACCGAGATATGTCCTATTGGTAGCACTACCTTATCTGCAACAACTAATGCAGACACCTATATTGGTCCAGAGAAGAAGAAAATCTCAAAGAAATGTGTTTTTCATCCATATCTTAATGCTAAAAATGTCCAAAGCACCGTTGAAATGAACAGCTTTGCGAGGCGTGCACTTTTAAAGCTGTTTGATAGAGTTTCTTGA 1284 0.3754 MTNLLKLKPGRMNYSIMVRIVRTWNVENSLIGGKINAIEMLLLDRADDKMHATVPSQSVDRVKPLLAEGRVYIISIFEVVPNIRDFMSTSNKFRIVVQPSTEFLLTGSSHIHLYGFSIASSSDIVKCRFGYSYSIDVIGVITAIHHDHYDNAEDSLSTVIKFEGKFECALYGKYVVDFQNMLKKAKNGLPVIVMLFARISSHNGSAVVQNEKDLTRLFVNPEFAEIVQYRKSLVMHELQSPLTKHKFSAEPMKGATLAVERNYLKKTISQLLATPELGIFIVCAKIMGFLRADRFWLNRESLDKLNGKDFIFTVKKSHPTYRSTYHDFEVLEMSNDLEVIRSYDSIGISYTPTKQAIFKPTFTEICPIGSTTLSATTNADTYIGPEKKKISKKCVFHPYLNAKNVQSTVEMNSFARRALLKLFDRVS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2822 427 CDD RPA1_DBD_A_like 15 101 - -
Mal8g2822 427 Gene3D - 110 240 IPR012340 -
Mal8g2822 427 SUPERFAMILY Nucleic acid-binding proteins 122 233 IPR012340 -
Mal8g2822 427 SUPERFAMILY Nucleic acid-binding proteins 3 103 IPR012340 -
Mal8g2822 427 CDD RPA1_DBD_B_like 136 233 - -
Mal8g2822 427 Pfam Domain of unknown function DUF223 40 102 IPR003871 -
Mal8g2822 427 Gene3D - 1 106 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2822 Mal-Chr8 72769341 72771651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2822 7 295 Core DNA Replication Machinery Family AT2G06510 22.857 2.13e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2822 - - mtr:MTR_8g062060 244.588