Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2814 ATGGCGGGACCATCATGGCTGGTGGACAAAAGTAGAATTGCAACCAAAATAAAAAGTGCATCGGGAGCATGTGATCTGGAAAATGTTACATGGAAAAGTAATCCTACCAAGGCTTGCCCAAATTGTCAGCATACTATTGACAATAGTGATGTTGCAAAAGAGTGGCCTGGCTTGCCAAAAGGTGTCAAGTTTGATCCATCTGATCAGGAGGTAATTTGGCACTTGCTTGCAAAATGTGGTGTTGGAAATTCAAAACCTCATCCTTTCGTTGACGAGTTTATTACTACTCTTGAAGTGAATGATGGAATTTGTTACACTCATCCTCAAAACTTGCCAGGTGTTAAGCAAGATGGAAATGCATCCCACTTCTTCCACAGAGCAATTAAGGCATATAATACAGGCACACGAAAGCGCCGAAAAATACATGATCAGGATTTTGGTGACGTCCGCTGGCACAAAACTGGAAGAACTAAACCAGTAATCTTGAACGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGCAGTGCAGGAGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTAGGAACAGAAGAGGATGAGAAGGATGGAGAGTTTGTTATCTCCAAAGTGTTCTACCAACAGCAGCAAGTCAAATCGGGTGATAAGGATGAACAGGATATTCCTGAAGCCACTGAAGCAACAATTACAAAAGTGGATCCGGTTACTCCCAAATCTGCGACTCCTGAGCCTCCTTATAGTGAAAGGCAGTATTCAGATGTAGATCTAGGACAAGACACACCCGCCATTACTCAGATGGATTGTCTGGATGAAGTTCAAGCTGATTGTGAAGAGCATGCAAAAGATTATCTATCCATGGTAGAAAATGTACTTAATGAAGGGACAGATAATGAAAATAATGCTGATGAAGGCCAAAAATGGTGGGATAGTGAATCACAAAATCTGTTGGATTCACAACAACTGGTTGAAGCATTGTCTTTGTGTGATGATTTTCTTCATAGCCAGTCTCCCACTAGAGATGGGAAACAAGAACAAAAGGACCAACCCAGCCTTTCTGTTTATGCTCAGCTAGGACCAGAGCATCTGAAGAAGGACATCGAAGACTGTCAAAATCTTGTTCTTGAGCCTGCAAATGTAGAGGATGACACACCTTCGGAGTTTCGACTAAGTCAATTGGAATTTGGTTCGCAAGATAGCTTTATAGCATGGGGTTACAACAAGGTAGTAAAGTAA 1260 0.4143 MAGPSWLVDKSRIATKIKSASGACDLENVTWKSNPTKACPNCQHTIDNSDVAKEWPGLPKGVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFITTLEVNDGICYTHPQNLPGVKQDGNASHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIMVLYMSSAGGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKSGDKDEQDIPEATEATITKVDPVTPKSATPEPPYSERQYSDVDLGQDTPAITQMDCLDEVQADCEEHAKDYLSMVENVLNEGTDNENNADEGQKWWDSESQNLLDSQQLVEALSLCDDFLHSQSPTRDGKQEQKDQPSLSVYAQLGPEHLKKDIEDCQNLVLEPANVEDDTPSEFRLSQLEFGSQDSFIAWGYNKVVK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2814 419 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 413 - -
Mal8g2814 419 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Mal8g2814 419 MobiDBLite consensus disorder prediction 220 262 - -
Mal8g2814 419 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Mal8g2814 419 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 413 IPR044799 GO:0003700
Mal8g2814 419 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Mal8g2814 419 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2814 Mal-Chr8 72488581 72494264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2814 5 223 NAC Transcription Factor Family AT4G28500 52.000 1.88e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g2814 NAM 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2814 - - gmx:100803236 694.886